Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4648g00004 ATGGCTAATCACACTGATTCACTTATTCCATTAGACATTAATGCCAATGAATGTGCGGTTGATGTGGCATATCATTCACCAAAGGAACGTGGCCCTGAAATCCGTAATTCAGATGAAAATGATGTTGTTCCTACACCACATAACGGTATGATATTTGGTTCGGAGGATGAGGTGAGATCATACTATGCAAAATATGCCAGCCAAGTAGGTTTTGGCGTCATGACAAGAACCTCAAGGAAGGTAGCTGATGGCAAGATTGGGTATTTTATACTTGCATGTTCTAGAGAAGGATTTAGAAGAAACAGTAGAAGAAATCCCATCAGAAGTGTTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCAACGTTTCTTTATGTAAAGATGGATTCTACAGGATTCAAACAGTTACGCTTAATCACAATCATGAACTGAGTCCAGGTCAGGATATTGACATGCGAGCTAAGAGGAAACTAGACCCAGAAGATCAAACTGAGGAGCAGATGAACAAGAGTTTCCGGTCTTTAGTGGTTGGAAATGGGGTTTATGATAATGTGACATTGTGTCCAAATGATTGTGGAAGCTATATTCGGACAGGAGGCCGGTTGATTGGTGCAAATGGAGATGGTAATGCTCTTTATAAATATTTCATGCGCATGCAAGAACAAGATTGCAATTTCTTCTATGTGATTGATTTGGATGAATATTTATGTGTGAGGAATGTTTTCTGGGCTGATGCTAGGAGTAGAGCTGCATACAAGTCATTTGGTGATGTGGTAACATTGGATACAACATATGTCTCTGACCAATACAAATTACCCCTCGTGTCTTTCGTTGGAGTGAACCATCATGGGCAATCTATACTTTTTGGTTGTGGGTTGATGTCATGCAGGGACATGAAGTCGTTTGTTTGGTTGTTCCAATCATGGTTACATTGCATGCATGGTGTGTCACCAAAAGGCATCATAACAGATGAATGCAAGGCCTTGCAAAATGCACTTAAAATTGTATTCCCCTTTGCTCGACATCGTTGGTGTTTATGGCATATAATGAAAAGATTTCCTGAAAAGTTAAGTCAGCGTGCTGACTACAAGTTGATAAGTTGTCGTTTAAAAACTGCTATATATGACACACTTACTCCCAATGAATTTGAGATGAATTGGAAAACAACCATGAAGGAATTTGGTCTACAGGACAATGAATGGTTGGATGAGTTGTACCTTGAGCGACATCGATGGGTGCCTACCTTTGTAAAGAGTGAATTTTGGGCTGGAATGTCTACCATTCGATATGGTGAAATTATGCATCCTTTTTTTGATGGCTTTGTTGGGTGCCAAACTACATTGAAACAATTTCTTGATGCATATGATAATGCATTGCAAGCCAGGGCAGAGAAAGAGTTTGAAGCTGATTTCCGCTCATTTTGCATTAGTCTTTCTTGTGCTACTAAGTCTCCATTTGAGCGGCAGTTTCAAACTGCTTACACTCATGCAAAGTTTTTGGAGGTTCAGCAAGAGTTTGTTGGAAAGGCTGATTGTAACATGGTGGTTGTTCATGATGAAGGTTCTGTTTGTCGTTATAATGTTATTGAAGATGTGATGGTAGAAGGTAAACCTAAAGAAGCTTCATTTGGAGTTATATTTGACAGGATAAACTATGATGTGAAGTGCGCTTGCCACATGTTTGAGTTCAGAGGAATAATATGTAGGCACTCGCTTGCTGTACTGTCCCAAGAGCGAGTTAAAGAGATTCCATGTAAGTATGTTTTGGATAGATGGAGAACAGATCTAAAGAGGAGACACGCATACGTTAGGACCAGTTACACTGTTAAACAACTCAAACCTCGAATTGAAAGATTTGATCTGTTGTGCAAGCAATTTGACTCTGTCGCTGAAGTTGCTGCTGAATTTGAGGAAACAAGTGCGTTTGTAAGTAATACCCTTTGTGACTTGAAGGAGAAACTGGAAGCATGGGCAAGCCATATGAGAAACTCATCTGAGGCGGCAGCACCAATAAGCTGTGCTATTAACGGTGCTTCTTGA 2040 0.4015 MANHTDSLIPLDINANECAVDVAYHSPKERGPEIRNSDENDVVPTPHNGMIFGSEDEVRSYYAKYASQVGFGVMTRTSRKVADGKIGYFILACSREGFRRNSRRNPIRSVPSRKQKCEARINVSLCKDGFYRIQTVTLNHNHELSPGQDIDMRAKRKLDPEDQTEEQMNKSFRSLVVGNGVYDNVTLCPNDCGSYIRTGGRLIGANGDGNALYKYFMRMQEQDCNFFYVIDLDEYLCVRNVFWADARSRAAYKSFGDVVTLDTTYVSDQYKLPLVSFVGVNHHGQSILFGCGLMSCRDMKSFVWLFQSWLHCMHGVSPKGIITDECKALQNALKIVFPFARHRWCLWHIMKRFPEKLSQRADYKLISCRLKTAIYDTLTPNEFEMNWKTTMKEFGLQDNEWLDELYLERHRWVPTFVKSEFWAGMSTIRYGEIMHPFFDGFVGCQTTLKQFLDAYDNALQARAEKEFEADFRSFCISLSCATKSPFERQFQTAYTHAKFLEVQQEFVGKADCNMVVVHDEGSVCRYNVIEDVMVEGKPKEASFGVIFDRINYDVKCACHMFEFRGIICRHSLAVLSQERVKEIPCKYVLDRWRTDLKRRHAYVRTSYTVKQLKPRIERFDLLCKQFDSVAEVAAEFEETSAFVSNTLCDLKEKLEAWASHMRNSSEAAAPISCAINGAS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4648g00004 679 Pfam MULE transposase domain 258 352 IPR018289 -
Pral4648g00004 679 Pfam FAR1 DNA-binding domain 60 145 IPR004330 -
Pral4648g00004 679 MobiDBLite consensus disorder prediction 26 47 - -
Pral4648g00004 679 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Pral4648g00004 679 SMART 26again6 554 581 IPR006564 GO:0008270
Pral4648g00004 679 Pfam SWIM zinc finger 555 576 IPR007527 GO:0008270
Pral4648g00004 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 656 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4648g00004 Pral-Chr4648 22009 25613 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral4648g00004 MULE 3.5e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4648g00004 - K17604 gmx:102660547 773.081