Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4647g00008 ATGAAGGAGGAAACGATTAGAAGGGCGGGGGGAGGAGTGGTCTGGGAAGAGTTGACGGCGGAGGCGGAGCAGACCAAGAAGAAGCTGCTGAATAAGGCCACTGGTTATGCACTGCCAGGAAGGCTCATGGCCCTCATGGGTCCCTCCGGCTCCGGCAAAACCACCCTCCTCCGCTCCCTCTCAGGAAGGCTGGCTGGGAACGTTGTAGTGACCGGCAACGTTCTAATCGGCGGGAAGAAGAAATGCTTCAAATGCAGAGAAGTGTCTTATGTGGATACAGAAGAACTGTTCTTGGGGACTTTGACGGTGAGAGAAACCTTAGCATACTCTGCAAATCTGAGGCTTCCTTCGAGAATGACACGAGAGGAGATAAGCAAGGTGGTGGAAGAAACCATAATCCAACTGGGTCTAGAAGAATGTGCAGACAGTAAGCTTGGGAACTGGCATTTACGTGGTATCAGCAGTGGCGAAAAGAAGAGACTCAGCATTGGCCTTGAGATTTTGACACAACCCCACGTCTTGCTTCTGGATGAACCCACAAGTGGGCTTGACAGTGCCTCTGCTTTCTACGTGATTCAAACCCTGTGCAGTATAGCTAATGATGGAAAGGTAGTTGTCTGTTCCATTCATCAGCTGAGCAGTGAACTCTTTAACCTTTTTGACGATCTTCTCTTGCTATCGAGCGGAGAAACTGTTTATTTTGGGAAAGCAAAGATGGCTTTGAAGTTCTTCACTGATGCAGGGTTCCCCTGTCCAGTTAGAAGGAATCCTTCAGATCATTTCCTTCTCTGTGTTAATTTGGACTTTGACGCCATTGATGCAGTTACGATGAGTTCTGAAGCAAGTATTCCTACGTCATCAAATCCTGCAACAGGCAAGAAAACAGAAGAGATTAGGGCGACACTCATCGAGAGTTACAAAAATTCAGAGCAGATGATCAACGCAAGAAGGAGAATTCAATGTTTGAAATCCAGTGGAGACCAAGTAATCGAGTCCAATGTCAGTGGCAGTATCAGCTGTTGGAAGCAGCTCTACACATTGACCCATCGATCATTCTTAAATATGTCAAGGGACGTAGGCTACTATTGGCTGAGGATCTTTTTCTATTCACTGGCAGCCACTGGTATTGGTCTCTTCTTTTTTCATCTTGGTACTGACAAGGACTCAATCTTGGCGAGAGGAAAGTGTGTATCATTCATTTATGGGTTCATAATTTGTCTGTCATTTGGAGGATTGCCACTTTTCATTGAAGAATTGAAGGTGTTCTACGGTGAGAGGTCCAAAGGGCATTACGGAGAAGCTGTGTTTGTACTATCAAACATCCTATCGTCTTTCCCTTTCCTACTTGTAACATCGGTCTTCTTTGTCACAATCACATACTCCATGGTGAAACTTCATCTGGATTTAGCTCAATGTGTTTTCTTTTTCCTCAACTTATTTGTGTGCCTATCTGTCATTGAGTGCTGCCTCATGGTAGTAGCCTCACTGGTGCCTAATGTCCTGATGGGCATAGGAGCAGCAACTGGAGTGATTCTTTTCATGATTATGTGTTCTCCAATGTTCAGACCGCTACCTGACCTTCCTAAGTTCTTTTGGCGCTACCCCATGTCCTACTTGAGCTTTGCTACTTGGGCAGTGCAGGGGCAACTCAAGAATGACATGCTGGGGCTTGAATTTGATCCTCTGATTCCTGGTAACCCCAAGGTTAAGGGAGAACAAGTTCTGAAAGTGATATTTGGGGTTTCATTAAATCATGGCAAGTGGTGGGACATAATAGCATTAGTTACCCTCTTAGTAGCTCACCGATTTATCCTTTTCTTGGTACTTCGATATAACAAGAGACGGATATCACCCTTGCGGTGGTTTTATGCCAAGGCAAGTCCACACTATGGTGAAAGATTTTCATTGAGCAACAAGCAACTTCGTGTCGCTTTCAAGAAACAGCAAGCTGTTCCATTACCTGCTGAATAG 1971 0.4541 MKEETIRRAGGGVVWEELTAEAEQTKKKLLNKATGYALPGRLMALMGPSGSGKTTLLRSLSGRLAGNVVVTGNVLIGGKKKCFKCREVSYVDTEELFLGTLTVRETLAYSANLRLPSRMTREEISKVVEETIIQLGLEECADSKLGNWHLRGISSGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQTLCSIANDGKVVVCSIHQLSSELFNLFDDLLLLSSGETVYFGKAKMALKFFTDAGFPCPVRRNPSDHFLLCVNLDFDAIDAVTMSSEASIPTSSNPATGKKTEEIRATLIESYKNSEQMINARRRIQCLKSSGDQVIESNVSGSISCWKQLYTLTHRSFLNMSRDVGYYWLRIFFYSLAATGIGLFFFHLGTDKDSILARGKCVSFIYGFIICLSFGGLPLFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLLVTSVFFVTITYSMVKLHLDLAQCVFFFLNLFVCLSVIECCLMVVASLVPNVLMGIGAATGVILFMIMCSPMFRPLPDLPKFFWRYPMSYLSFATWAVQGQLKNDMLGLEFDPLIPGNPKVKGEQVLKVIFGVSLNHGKWWDIIALVTLLVAHRFILFLVLRYNKRRISPLRWFYAKASPHYGERFSLSNKQLRVAFKKQQAVPLPAE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4647g00008 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 253 IPR003439 GO:0005524
Pral4647g00008 656 Pfam ABC-2 type transporter 210 264 IPR043926 GO:0140359
Pral4647g00008 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 13 625 - -
Pral4647g00008 656 Pfam ABC-2 type transporter 343 552 IPR013525 GO:0016020|GO:0140359
Pral4647g00008 656 SMART AAA_5 39 230 IPR003593 GO:0016887
Pral4647g00008 656 Pfam ABC transporter 39 181 IPR003439 GO:0005524
Pral4647g00008 656 Gene3D - 13 258 IPR027417 -
Pral4647g00008 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 242 IPR027417 -
Pral4647g00008 656 ProSitePatterns ABC transporters family signature. 153 167 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4647g00008 Pral-Chr4647 47584 52715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4647g00008 28 214 Calmodulin-binding Proteins AT2G36910 29.897 3.80e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4647g00008 - K05681 gmx:100802207 857.44