Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00092 ATGGCAAAGTGGAACTGCTTGTTTGGATGTAGCAAAAAGCTATCAACTTGCGAAGCAAAGCCCAAAAATTTAAGGAGATGGAGTTGTGGTCTTGGGGGGGTCAAGCAGAAACAGCATGCGGCGCTTACAGAACCAATCAGAACACTACGTGAAGCAAGAGAAGAACAGAGAAAGCATGCAATGACAGTGGCTGTTGCAACAGCAGCAGCTGCTGAGGCTGCAGTTGCTGCTGCTCATGCTGCTGCCGAAGTTGTCAGGCTCACAGGTGCTTCTCGCTCCTACTCATATCTCTCCAAGGGAAACCGAAACTTGGCCGCTAGTAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTTAGAGCACTGAAAGGAATTATCAGATTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGGCGTCAAATGGGTTTGCGTTCCAACAGAAAAAAGCAGGTAGGAATCCAGGAAAGCAGTAGTCATGCTGCAGATAGAATTAGCAAAGATGCTAAAAGTAAGCAGCTTCCAAAGCAGAAAAAGAAGTTGGAAGATACGGAAATGAAGTTACAGCTTGAATGCCATAGTCAAAGAACTTGGGACTGCAGCTTGCACTCAAAAGAAGACATTGAAGCTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGAGAACGCATGAAGCAGTACTCTTTCTCACAACGGGAGAGAAAATTTTGCCACATGGGGGTTGAATCTGTTCCCTATAAGGAATTTAGAGGAGAGAGCTGCCGTACTCTAGGACAATGGCTGCACAGAGAAAAATGTAATGGAGATGTGATTTATGAAACAACAATTCCTTCAAATTTGATTGCTAGGGAATGGCGTGATGCAACACAAGTTGAAGAGAAGAATGTGAAAATAGGAGAACATCTGCAAGAAGACGACTTGACTTCAGTCACTTCACAGCTTTCATTCCCAAGGAAATCATTTTCTTTTCTGAAGAAAAGTTCAGTTGTAGATGGCAGTTCCATGCCAAATTCTCCAATTTTCCCAACACTCTTGGGTGTGACAGAATCTGTGAGAGGAAAGGCAAGGTCTATGAGCACTCCGAGACAAAGAACAGGATTTATGGACAGATTCTCGGAGTGA 1131 0.4385 MAKWNCLFGCSKKLSTCEAKPKNLRRWSCGLGGVKQKQHAALTEPIRTLREAREEQRKHAMTVAVATAAAAEAAVAAAHAAAEVVRLTGASRSYSYLSKGNRNLAASKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAVRRQMGLRSNRKKQVGIQESSSHAADRISKDAKSKQLPKQKKKLEDTEMKLQLECHSQRTWDCSLHSKEDIEAIWLRKQEAIIKRERMKQYSFSQRERKFCHMGVESVPYKEFRGESCRTLGQWLHREKCNGDVIYETTIPSNLIAREWRDATQVEEKNVKIGEHLQEDDLTSVTSQLSFPRKSFSFLKKSSVVDGSSMPNSPIFPTLLGVTESVRGKARSMSTPRQRTGFMDRFSE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00092 376 Gene3D - 101 153 - -
Pral4646g00092 376 PANTHER IQ-DOMAIN 5-RELATED 44 367 - -
Pral4646g00092 376 MobiDBLite consensus disorder prediction 355 376 - -
Pral4646g00092 376 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Pral4646g00092 376 SMART iq_5 101 123 IPR000048 GO:0005515
Pral4646g00092 376 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Pral4646g00092 376 MobiDBLite consensus disorder prediction 163 182 - -
Pral4646g00092 376 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Pral4646g00092 376 MobiDBLite consensus disorder prediction 356 370 - -
Pral4646g00092 376 MobiDBLite consensus disorder prediction 145 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00092 Pral-Chr4646 455228 458141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00092 1 372 IQD Protein Family AT5G03960 44.588 1.14e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00092 - - pcin:129306532 555.444