Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00072 ATGATCCATCAGACTTTCGAAACTGAATCTACCTCCAGTAGTTATGCAAAATCTGAAACTGACGGTATGCCGGAAACAGAGTCCTCTGTTTCTAGCAATCTACAAGATGGAGGTAGATTGGAACCCAAGAAGAAATTGAAGGGACTGAGGTCAATTCGGCTTCAGCGATTGTCAAGCATGAGGTCATCCATTAAAGGACCCAAATCCCGGAACGAAAATATTGATTCACAAAGTTCAGGACGACATTCTTCGGTAGTAATGTCAGATGCATCGCCCAATTATATGAAGGCAACCAACAGTTCTCATTCAAAGGAAAGCTTCCAGAGTTCCGAAAGAATGTTCACGAGGAAGAACTTATCTAGAATACCAACTTTGAAATTGAGGAGGAGTTTGACCAGAAAGCTATCTGGAGGGACTGAGTTGAAGAGGAAACTGAAGTCGTCAAGATCAATCAAGCTCACATCTGTTAAGGGGCTGAGATCATCCAGGCAGGGGAAAAACCAAGGCAAGGCAGGCACTTTTAACGACAGTCAGAGTAATAAGCATCCAAGTGAGAATTCTCAGGTAGTTGTGACCAGAAGATTAAGTTTCAAGTTAAGCAGTCGATATATGTTCAGGTCGAGAAAAGTTTTTGAAGATGAAAGCTCTCAGATATCGCGATCATCGGACTCAAGTCTGCACAAAGCCACATGTTCTTCAACTCTCAAAGATTCCCATTTTCCAGATAAGATTGAGCTGCCGCTTGAAGGAAATGGATCTCAAGAAGTACTGTTAACAAGGAAGGTCTGTCCGTATACTTATTGTTCTCTTCATGGTGGTCACCGTGACAATGTGCCTCCACTGAAACGTTTTGTCTCAATGAGAAGACGTCAATTGAAGACCCAAAAGAACACAAATATGGGGAGTCGGCCTGTTACAAAATCAAAGCATTCTGGTAATATAAAGAAAGGCAATCAGACGAGTCGGAGTACCTCTAGTGAAAATCCCGTGAATATTACAGCCGATTCTAGCAAATCTCATCATCAGAATGATAAAAGGCCAGCAAGGGACCTGCCTGTTAAGAGTCGCGACACACCAGCTTCCACTTTCAATGGAGGAGGCTCATCTGGAGGAGATAATAAAGAAAACATAAATTTCAGATGTAATGCTGAGGTGTTGCTTGGCGAAACATCATTTCCACATATAACTTTTGATCAGTATCTCAACGATTCTCTCGCAGAAAATGGGTATGCATTATCTTCCTTTCCTGCAATCAAGGAGAAACCAGACTCCAAATTTATTGAGACAGCAAGCAAGGACAGTATATTGGCTGCACGCAATAAATGTGATGAAAGCACTCAGTCTGTGCTCATGGATGATCGGACTGATATCACAAACTCTGACTTGATGCTGCCTGAATATCCTGACATTTGTGATAAGCATTCCAGTTTGAAAGATGATAGTGTTGTAGCTTGTCACGAGGTTCATGGAGTGGAAGCCTCCGAAGATAAACAGGAAGAAAGAAACTCAATCCTGGAGCTGATTGATCCTGAATCATCTGGGGAAAGCTTAAATGCCGATGAGTACAGGAGTGTAGGAGATCAATCACTAGATAATTCAAAAGCATCTGATCAAACTATTGTTGTGGAGTTAGCTTCAACGCCTGCGGCCATGTGTTCTGCTTCCAAAATTCATAAATTGGAGGAAGAAATAATGACCAAAGACAAAAATATTGATTCAGAGTATGGAATGCTGCAGGAGACGTCTCCACAGAGAGAGTCTGAGCCTGCTTCCACCGCTGATGCTTCTTACAAAATGCCTGAAGGAGATAGGAAGTATATAAAGATGTGGCACTTGATGTATAAACATGCAGTATTGAATAATGCAGAAAACGGAGAAGACAGGCTTCAATCTGACCAGGAGGATAAGAAAGCGCAAGGGAAAGATGGTCTTTCATCTAATGGAGTAAACAACTCAACTTTCCAGGATACCGATGATGAAAATGAGAATGTAGTTAAGCTTGTGCAGAAAGCGTTTGATGAAATTCTTCTCCCAGAAATGGAAAATATCTCTTTTGGGGGTCGCTTAAAATCTCAAGGCATGGCTTCAGAGGATGAGCTCGTAGAGAAGGGTCAAGGTAAGGAAAGAGACGGGAGCACCTCAACATCCAGAGATTCTCCTCAAGAAGAAGCAAGGCTGAAACTTGACGATGATGATGATGAAGAGAAAGCGTCTCTGAAGACGGGAAATAAACTTGAGCCAAAAACACCAAAGAGCTGGAGCAGACTGAAAAAATTACTACTGCTGAAAAGATTTGTAAAGGCGATAGACAATGTAAGAAAAATTAACTTCGGAAAACCCAGACATTTGCCTTCAGATGCCAACCTACAAGTCGAAAAAGTTCATCTCAGGCACCTGACGCCAGGGGAGGGAAAAAATGTTGAGGAATGGATGCTTGACCATGCACTTCAGAAGGTTATCTCCAAACTAGCTCCTGCTCAGAAGCAACGGGTTGCACTTCTAGTAGAAGCATTTGAAACAGTTCTGCCATTTCAGGACATTGAAAATGGCCCCCCATCCTCTGCAGCAGTTGAAACTCAAGTTACTGCAGTTCAAGGCCTTGATGGTTCCTTAAATCTTGGCGAGGAAGCAACAGGCAGAGAGAGGGAATATGACCTTTCAGCCAAACTATTGCTCGGCAAAGCATTCCATTCTCACAAAACTTTCGAAGAACATGCTGATGACGCCAGTGACAACCCAATGGCAGAACAGCGAGGCTCTAATATGGTTGAAGAGGCCAAGAACAACCCCACCTCCACAGCCATTGATGGAGATTCGATTGGAAAGCAAAGTTTTGCTGGCAATCATGATAAGGAGAAGAACAACACGATTATTAACGATAATGTTTATCTTGCAGAAACCAAAGATTCAGTATCGTTGTCCTCAGGCATGCTAGCTGACAAGATAAGCACCTCTCTTGAGGAGGCCCTAGCTAATGAAATGGTCAACGGAGTTTCACAAGACATGATATCTGGTTCAACTACAGAAATTCCAAGTGGTAAATCAGAGTCACATGGAAGAGATTTTGAAACTGAGAATCTCATCCATGCAAGAGAGGAACCTCATTCTACGTCAAAAAGCTTAATTCTAAAAGGATTTGCAAGAGCATTGGGATCTAGTTTGGCCCCTTCAGCTTCTCCAGCTTCTCCAGATCAATCAGATGAACCAGTAGCAGGCAGTGAAGAAAGTATAGCGAAGGCTAAGCCAGAAATTAAGAACCTTGAACAATTCCCTCCGGCTGAAGGAACTATGATCCAACGAGAAAAACAGAACCACACAGGGCTTTGGTACTTGGTATATAGGCATATGGCATCAGGTATAGCAGCTAATGATTTCAAGCCGCTTGTGGATGGAGAGGACGAGAAAGAGCAAGGATATGATAATAGTGGAATCACAGGAATGGATACTTCCATCTCTGATGGAAGCATACCTTTGGCAAATCAACATATACCTTCATACGATCATCCTGTTACTGACTCAGAAGCTGGACCTGAGCAGCTTGAAGCCATCAAGATTGTAGAAGAAGCCATTGATGCGATCCTTCCAGATGCACAGGAACATTCACATGATGGTTGGTCAGTCACTGACAGCAATATTTCTGACAACTCCAAACAGTTCCATGGAGTCGAAGGAGTCAACAGTGAAGACTTGTACCAAAAAGAAGATAGGGTGACATCGGATAATGGAATGACCCAAGAACAAGATGGAGAACCAGAGTTGAAGGAGGGAAACAAACCATTATCTAGGAGTTGGAGCAATCTTAAAAAAGTGGTCATGCTCAGAAGATTTATCAAGGCATTAGAAAAAGTCAGAAAATTCAATCCTCGAGGACCTCGATATTTGCCGGCTGAGCCTGATCCAGAAGCAGAAAAGGTAAATTTAAGGCGCCAGGACATGGGAGAAAGGAAAGGTTCAGAAGAGTGGATGCTTGATCATGCACTGAGACAGGTTGTGGCCCAATTAACCCCGGCTAGGAAAAGAAAAGTGGGGTTGCTCGTGGAAGCTTTTGAAACCGTCATGCCAACCATCAAAAACTGA 4077 0.4283 MIHQTFETESTSSSYAKSETDGMPETESSVSSNLQDGGRLEPKKKLKGLRSIRLQRLSSMRSSIKGPKSRNENIDSQSSGRHSSVVMSDASPNYMKATNSSHSKESFQSSERMFTRKNLSRIPTLKLRRSLTRKLSGGTELKRKLKSSRSIKLTSVKGLRSSRQGKNQGKAGTFNDSQSNKHPSENSQVVVTRRLSFKLSSRYMFRSRKVFEDESSQISRSSDSSLHKATCSSTLKDSHFPDKIELPLEGNGSQEVLLTRKVCPYTYCSLHGGHRDNVPPLKRFVSMRRRQLKTQKNTNMGSRPVTKSKHSGNIKKGNQTSRSTSSENPVNITADSSKSHHQNDKRPARDLPVKSRDTPASTFNGGGSSGGDNKENINFRCNAEVLLGETSFPHITFDQYLNDSLAENGYALSSFPAIKEKPDSKFIETASKDSILAARNKCDESTQSVLMDDRTDITNSDLMLPEYPDICDKHSSLKDDSVVACHEVHGVEASEDKQEERNSILELIDPESSGESLNADEYRSVGDQSLDNSKASDQTIVVELASTPAAMCSASKIHKLEEEIMTKDKNIDSEYGMLQETSPQRESEPASTADASYKMPEGDRKYIKMWHLMYKHAVLNNAENGEDRLQSDQEDKKAQGKDGLSSNGVNNSTFQDTDDENENVVKLVQKAFDEILLPEMENISFGGRLKSQGMASEDELVEKGQGKERDGSTSTSRDSPQEEARLKLDDDDDEEKASLKTGNKLEPKTPKSWSRLKKLLLLKRFVKAIDNVRKINFGKPRHLPSDANLQVEKVHLRHLTPGEGKNVEEWMLDHALQKVISKLAPAQKQRVALLVEAFETVLPFQDIENGPPSSAAVETQVTAVQGLDGSLNLGEEATGREREYDLSAKLLLGKAFHSHKTFEEHADDASDNPMAEQRGSNMVEEAKNNPTSTAIDGDSIGKQSFAGNHDKEKNNTIINDNVYLAETKDSVSLSSGMLADKISTSLEEALANEMVNGVSQDMISGSTTEIPSGKSESHGRDFETENLIHAREEPHSTSKSLILKGFARALGSSLAPSASPASPDQSDEPVAGSEESIAKAKPEIKNLEQFPPAEGTMIQREKQNHTGLWYLVYRHMASGIAANDFKPLVDGEDEKEQGYDNSGITGMDTSISDGSIPLANQHIPSYDHPVTDSEAGPEQLEAIKIVEEAIDAILPDAQEHSHDGWSVTDSNISDNSKQFHGVEGVNSEDLYQKEDRVTSDNGMTQEQDGEPELKEGNKPLSRSWSNLKKVVMLRRFIKALEKVRKFNPRGPRYLPAEPDPEAEKVNLRRQDMGERKGSEEWMLDHALRQVVAQLTPARKRKVGLLVEAFETVMPTIKN 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 135 189 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 290 375 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 1224 1260 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 695 742 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 55 112 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 688 750 - -
Pral4646g00072 1358 SMART CaM_binding_2 733 843 IPR012417 GO:0005516
Pral4646g00072 1358 SMART CaM_binding_2 1240 1354 IPR012417 GO:0005516
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 338 353 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 627 641 - -
Pral4646g00072 1358 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 3 1050 IPR044681 GO:0005516
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 151 189 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 1 36 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 578 597 - -
Pral4646g00072 1358 Pfam Plant calmodulin-binding domain 738 843 IPR012417 GO:0005516
Pral4646g00072 1358 Pfam Plant calmodulin-binding domain 1260 1354 IPR012417 GO:0005516
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 1 112 - -
Pral4646g00072 1358 Coils Coil 619 639 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 1053 1091 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 1227 1257 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 626 660 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 643 658 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 291 337 - -
Pral4646g00072 1358 MobiDBLite consensus disorder prediction 357 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00072 Pral-Chr4646 365940 371181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00072 608 856 Calmodulin-binding Proteins AT5G04020 31.765 1.18e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00072 - - pcin:129305968 1910.19