Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00055 ATGGGAATGGCCGCGGAGTCCCAATTTCATGTCTTGGCCGTAGATGATAGCCTCATAGACAGGAAGCTGATTGAGAGGCTGCTCAAGACCTCTTCCTATCAAGTTACTACGGTGGATTCTGGTAGCAAGGCTTTGGAGTTCCTGGGCTTGCGCGACCGTGACCAGATCGACCCCGGCACGCCATCGGTTTCTCCTGGCAGCCATCAGGAGGTGGCGGTGAATCTTATTATTACGGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCGGTGGTGATTATGTCGTCGGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTCAAGCCAGTGAGGCTGTCGGATTTGAACAGGCTTCGACCCCATTTGATGAAGACAAGGTTGAAAGAACAAAAGCCTGAGACGCAAGAAAATCCTGAAACCCCACTAGTTAAACCAGTTGAAAATCAAATTGCTGTGCAGCAACCTACACCACAGCCACAACTAGATCAACAACAACCACAATCACCACAAGCAGCCGGTAGTAACAAGAGAAAGGCCATAGAACAACAGGGGCTTTCACCTGAGACTGACAGAACGAGACCAAGATACAGTGACATTGCCACAGTTGTGTGA 681 0.4816 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRDRDQIDPGTPSVSPGSHQEVAVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLRPHLMKTRLKEQKPETQENPETPLVKPVENQIAVQQPTPQPQLDQQQPQSPQAAGSNKRKAIEQQGLSPETDRTRPRYSDIATVV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00055 226 CDD REC_typeA_ARR 11 141 - -
Pral4646g00055 226 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pral4646g00055 226 Gene3D - 10 217 - -
Pral4646g00055 226 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Pral4646g00055 226 SMART REC_2 9 142 IPR001789 GO:0000160
Pral4646g00055 226 MobiDBLite consensus disorder prediction 170 213 - -
Pral4646g00055 226 SUPERFAMILY CheY-like 8 153 IPR011006 -
Pral4646g00055 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 181 IPR045279 GO:0009736
Pral4646g00055 226 MobiDBLite consensus disorder prediction 147 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00055 Pral-Chr4646 290783 292853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00055 1 226 Response Regulator Gene Family AT3G57040 63.071 2.55e-96 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4646g00055 Response_reg 1.5e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00055 K14492 - gmx:100814494 301.597