Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00048 ATGACTAGCATTGAGAACGAGAGAAGCTATGAGTATTGTTTGGATCAAAATGATGATGAGGAAGTTGGAGACGTCGACACTACCAACCTTGTGAGAGGTAGCGGAAATGATGAAGGAGAAAATCACGAAGCAGCGGCGGAGGCTTTCTCTTCTCGTCAATGGCCACAAAGCTATAAGGAGACTATTGATGCTTACGCAATTACGGCATCACCACAATTTGGAGGGCTTCTTCAAACACCAGGGGCGATGTATTCAAGTTTTACGACTTCAAAAGGCGGCGACTCTGAGCTCGACGGGAAGGCTCCTTTTCTATCTGGTAACGAAGCAGGCAGTGATCACGCTCAGAATGATGGGTTGGGAAGCATCTCATCAGCGAGGCATAACGGTGCTCCACATCATGAACAACACACCGGAGAATCAGCAGCTGGTTCTGTGTGCAGCTTCACTCAAACAGTTTTTAATGGGCTGAATGTGTTGGCAGGCGTAGGGCTTCTGTCGGCGCCAAGCGCGGTGAAAGAAGCTGGGTGGGCGAGCATAGTGTTGTTGTCACTGTTCGCGGTTGTGTGCTGCTATACGGCGCATCTTATGAAGCAGTGCTTTGAGGAGAGACCGGGAATCAAAACCTACCCTGATATTGGAGAAGCTGCTTTTGGAAGATATGGTCGTCTTGCTGTCTCCATTATTCTGTACGTTGAATTATATTCATATTGTGTGGAATCAATTATCCTGGAAGGAGATAACCTTGCAAGGTTGTTTCCCGGAGCATCCTTGGACACTGGTAGTATCCAACTGGACTCCAGCCATCTGTTTGGAGTTTTGGCCGCCCTCGTTGTTCTCCCTACTGTGTTGTTGAAGGACTTTCGCAAAATATCCTATCTTTCAGCTGGAGGGGTTTTAGCAACAATTTTAGTACTTGTGTCTGTGATTGTGGTTGGAGCAACAGAAGGTATGGGATCACATCCCACTGGTCAGCTAGTGAATTGGAGAGGAATCCCTTATGCTATCGGTATCTCTGGGTTTTGTTATGCCGGACATCCAGTCTTCCCTAACATTTACCTGTCAATGGCTGACAAAACAAAATTTACCAAGGCCTTAATAATATGCTTTCTTCTGTGCTTTTTAATGTATGGGAGCGTTGCCGTCGTTGGATATCTGATCTATGGTCAATACACTCTCCCTCAGATAACGTTAAACATGCCACCACATGCTTTTGCTTCTAAAGTTGCACTGTGGACGACATGTTCCTTAATGATGGACAAGTATGCTTTATTGATGATCCCACTCGCGAGGAGTGTGGAGGAGTTGCTGCCGGCTGAAGTTTCACATAACAATAGGTGTTTCGTGATTCTGAGAACATCAATTGTTATATCTACAGTTTGCGTTGCTTTTCTGATTCCTTTTTTCGGTTAA 1410 0.4567 MTSIENERSYEYCLDQNDDEEVGDVDTTNLVRGSGNDEGENHEAAAEAFSSRQWPQSYKETIDAYAITASPQFGGLLQTPGAMYSSFTTSKGGDSELDGKAPFLSGNEAGSDHAQNDGLGSISSARHNGAPHHEQHTGESAAGSVCSFTQTVFNGLNVLAGVGLLSAPSAVKEAGWASIVLLSLFAVVCCYTAHLMKQCFEERPGIKTYPDIGEAAFGRYGRLAVSIILYVELYSYCVESIILEGDNLARLFPGASLDTGSIQLDSSHLFGVLAALVVLPTVLLKDFRKISYLSAGGVLATILVLVSVIVVGATEGMGSHPTGQLVNWRGIPYAIGISGFCYAGHPVFPNIYLSMADKTKFTKALIICFLLCFLMYGSVAVVGYLIYGQYTLPQITLNMPPHAFASKVALWTTCSLMMDKYALLMIPLARSVEELLPAEVSHNNRCFVILRTSIVISTVCVAFLIPFFG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00048 469 Pfam Transmembrane amino acid transporter protein 147 469 IPR013057 -
Pral4646g00048 469 PANTHER OS05G0424000 PROTEIN-RELATED 145 469 - -
Pral4646g00048 469 MobiDBLite consensus disorder prediction 109 123 - -
Pral4646g00048 469 MobiDBLite consensus disorder prediction 87 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00048 Pral-Chr4646 221985 225587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00048 16 469 Amino Acid or Auxin Permease AAAP Family AT2G41190 57.048 4.20e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00048 K15015 - cit:102615499 535.798