Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00045 ATGCCAAGCTACGCTCCACATTTGCCTTCTAGTTCCATGGATATAGAGGGATCTGCCGTTCATCATTCTCAAATATCTGAATTTGGAGCCCTTGAGCAATCACTTGGATTTCGTGTAGATGATGCTATCAATCTTAGCAGAAATCCAATATTCAGTCAAATCAAATCAAATAGCCAGGTTCTTGGTGGCGATGTTCAACTTGGTGCATTAAGTAAGATACCATCACAAGCATCCTCAGATATGAGACTCTCTGCTGCAATTGTGGCATCTCAGACACTGCCATTACAAAGAGACACACAACCTAATCTGGCTTCTATATCTGGTGGCCCTCGCGAGTACTGGGGGGAGTCAAACATTGCAGATGCAAGCCCTAGGACTGATACTTCAACAGATGACACAAACTCTAAAAATCAAAGGCCTGAAAGGGGCCGCTCATCTATTGCAGTATCTGATTCCAACGATAGATCAGATCAAAAGACACTGCGACGGCTGGCTCAAAATCGTGAGGCTGCCAGAAAAAGCAGACTAAAGAAAAAGGCATATGTACAACAATTGGAAAGTAGCAGGCTGAAACTGACCCAACTTGAGCAGGAGCTTCAGCGAGCCCGCCAACAGGGCATTTTCATTTCAAGTGCAGGAGACCAATCCCATTCATTGAGTGCAAATGGTGCCATGGCATTTGATATAGAGTATGCACGATGGTTAGAAGAGCATAATAAACAAATCAATGAGCTAAAGGCTGCAGTCAATTCCCATGCTGGAGATATTGAGCTGCGTACAATTGTTGACAACATCATGACTCACTTTGATGAGGTTTTCAGACTGAAATGTGCTGCAGCAAAAGCTGATGTTTTCCACATCCTGTCTGGATTGTGGAAGACTCCAGCAGAGAGGTGTTTCATGTGGATAGGAGGCTTCCGCTCTTCTGACCTTCTGAAGCTTCTTGTAAGTCAGTTGGAGTCCTTAACTGAGCAACAAATGATGGGCATCTACAACTTGCAGCAGTCTTCCCAACAGGCTGAAGACGCTCTGTCCCAAGGAATGGATGCATTGCAGCAATCACTGGCCGAGACCCTTGCTGATAATTCACCCAACCCTTCAGGGTCGTCCACGAACGTGGCACATTATGTGGGCCAAATGGCCAAGGCCATGGGGAAGCTTGGCACACTTGAGAGGTTCCTTCGCCAGGCTGATAATCTACGACAGCAAACATTACAACAAATGCTGCGGATATTAACCATCCGGCAATCGGCTCGAGCTCTACTCGCGATAGGTGATTATTTCTGTCGGCTAAGAGCCTTGAGCTCACTGTGGCTTGCCCGACCACGGGAATGA 1335 0.4644 MPSYAPHLPSSSMDIEGSAVHHSQISEFGALEQSLGFRVDDAINLSRNPIFSQIKSNSQVLGGDVQLGALSKIPSQASSDMRLSAAIVASQTLPLQRDTQPNLASISGGPREYWGESNIADASPRTDTSTDDTNSKNQRPERGRSSIAVSDSNDRSDQKTLRRLAQNREAARKSRLKKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSAGDQSHSLSANGAMAFDIEYARWLEEHNKQINELKAAVNSHAGDIELRTIVDNIMTHFDEVFRLKCAAAKADVFHILSGLWKTPAERCFMWIGGFRSSDLLKLLVSQLESLTEQQMMGIYNLQQSSQQAEDALSQGMDALQQSLAETLADNSPNPSGSSTNVAHYVGQMAKAMGKLGTLERFLRQADNLRQQTLQQMLRILTIRQSARALLAIGDYFCRLRALSSLWLARPRE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00045 444 CDD bZIP_HBP1b-like 159 211 - -
Pral4646g00045 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Pral4646g00045 444 Gene3D - 158 210 - -
Pral4646g00045 444 Coils Coil 178 205 - -
Pral4646g00045 444 MobiDBLite consensus disorder prediction 99 160 - -
Pral4646g00045 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Pral4646g00045 444 Coils Coil 235 255 - -
Pral4646g00045 444 Pfam Basic region leucine zipper 156 201 IPR004827 GO:0003700|GO:0006355
Pral4646g00045 444 MobiDBLite consensus disorder prediction 140 154 - -
Pral4646g00045 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Pral4646g00045 444 FunFam BZIP family transcription factor 158 207 - -
Pral4646g00045 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
Pral4646g00045 444 Pfam Seed dormancy control 241 317 IPR025422 GO:0006351|GO:0043565
Pral4646g00045 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Pral4646g00045 444 PANTHER TRANSCRIPTION FACTOR TGA9 114 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00045 Pral-Chr4646 195280 200412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00045 119 444 bZIP Transcription Factor Family AT3G12250 72.205 1.23e-166 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4646g00045 DOG1 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00045 K14431 - gmx:778136 647.891