Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00039 ATGATATCTCAACCGCTTGCCATGGCTGCAACGTTGATACTTGTGGTTCTTGCACAAATATGCACATCAGTTACTTCACTGTCAGAAGCTGATAAGATTACTAGTTTGCCAGGGCAGCCACCGGTCAAGTTTAACCAATACGCTGGTTATATTACCGTTGATGAGAACCAGCACAGAGCTCTATTTTACTATTTTGCTGAAGCAGAATCAGAACCTGCTTCTAAGCCATTAGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGAGCGCTCGTTGAACATGGACCTTTCAAACCAAGTGAAAACGCCCTCGTGAAAAATGAATATAGTTGGAACAGAGAGGCAAATATGCTATACGTGGAATCACCGGCCGGGGTTGGTTTCTCATACTCTGCTAATGAATCATTCTATGAATTTGTGAACGACGAAATCACAGCAAGAGACAATCTTGTTTTCCTACAACGTTGGTTGACCAGATTCCCAGAGTACAAAAGCAATGATTTCTTTATCACGGGGGAGAGCTACGCAGGTCACTATGTACCCCAACTTGCACAGCTTATTGTTCAAACCAAAACAAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTTTGGAATTTAATACTGATCTAAATTCTAGAGCCGAATTCTATTGGTCACATGGGCTAATATCAGATTCGACTTACAAGGTCTTTAGCACCACTTGTAATTTTTCCCAAATTTGGAGACAATATCACAGTGAGACTCCAAGTGTCAGCTGTGCAGAAGCGAATAAACTGGTGACAAGGGAGATTGGTAACTTTGTTGATCGATACGATGTCACTCTTGATGTTTGTTTGTCATCCATAGATAAGCAGGCTCAAATGCTAAATCAACTGCAAGAGACAGCCAACATAGATGTTTGCTTGGAAGATGAAACATCTGCATATTTGAACAGGAAAGAAGTACAGGAAGCTCTGCATGCAAAGCTTGTGAGAGTTATCAATTGGTCTATTTGCAGCGAGGTGCTAAGATATGACAATCAGAATCTAGAAGTACCAACAATTCCGATTCTAGGAGAACTCGTTAAGTCCGGCATCCAGGTTTTTGTGTACAGTGGAGATCAAGACTCAGTGGTCCCATTGACCGGAACACGTTCTCTGGTGAATAAATTAGCCAAGGAGTTAGGACTAAATACAACCGTGCCTTACAGGGCCTGGTTCGAGGGGAGACAGGTTGCTGGATGGACACAAGTTTACGGTAACATTTTATCATTTGCGACCATAAGAGGGGCGGGTCATGAAGCCCCATTTTCGCAGCCAGAGAGATCACTCGTCCTTTTCAGATCATTGCTCCATGGAAAGCCCCTTCCAGATGCCGCCCCTTCAACCTAA 1389 0.4348 MISQPLAMAATLILVVLAQICTSVTSLSEADKITSLPGQPPVKFNQYAGYITVDENQHRALFYYFAEAESEPASKPLVLWLNGGPGCSSVGAGALVEHGPFKPSENALVKNEYSWNREANMLYVESPAGVGFSYSANESFYEFVNDEITARDNLVFLQRWLTRFPEYKSNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDLNSRAEFYWSHGLISDSTYKVFSTTCNFSQIWRQYHSETPSVSCAEANKLVTREIGNFVDRYDVTLDVCLSSIDKQAQMLNQLQETANIDVCLEDETSAYLNRKEVQEALHAKLVRVINWSICSEVLRYDNQNLEVPTIPILGELVKSGIQVFVYSGDQDSVVPLTGTRSLVNKLAKELGLNTTVPYRAWFEGRQVAGWTQVYGNILSFATIRGAGHEAPFSQPERSLVLFRSLLHGKPLPDAAPST 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00039 462 Gene3D - 307 342 - -
Pral4646g00039 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Pral4646g00039 462 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pral4646g00039 462 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Pral4646g00039 462 FunFam Carboxypeptidase 353 452 - -
Pral4646g00039 462 Pfam Serine carboxypeptidase 37 451 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
Pral4646g00039 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 439 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 Gene3D - 353 452 - -
Pral4646g00039 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pral4646g00039 462 FunFam Carboxypeptidase 26 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00039 Pral-Chr4646 174546 177297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00039 315 455 Calmodulin-binding Proteins AT2G22960 29.787 1.64e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00039 K16297 - gmx:100805028 729.554