Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00038 ATGGCAAGGCGCTTGGGTCCCTTGCTTAATCGCGTTTTGGTGGAGAAAATCGTTCCTCCGTCCAAAACTAACGCCGGGATTTTGCTACCCGAGAAATCCAGTAAGCTGAATTCTGGAAAAGTTATTGCTGTGGGCCCTGGCATTCATGATAGAGAGGGAAGGCTAATTCCTGTAGCTGTAAAGGAGGGTGACACTGTCCTTTTACCTGAATATGGAGGATCAGAAGTGAAGCTGGGTGACAAAGAGTATCATTTATATCGTGACGAGGACCTACTGGGAACGTTGCATGATTGA 294 0.4694 MARRLGPLLNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGIHDREGRLIPVAVKEGDTVLLPEYGGSEVKLGDKEYHLYRDEDLLGTLHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00038 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Pral4646g00038 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 FunFam 10 kDa chaperonin, mitochondrial 1 97 - -
Pral4646g00038 97 CDD cpn10 7 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 2 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pral4646g00038 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Pral4646g00038 97 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00038 Pral-Chr4646 172782 174394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00038 3 96 Calmodulin-binding Proteins AT5G20720 38.542 5.21e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00038 K04078 - rvl:131322220 177.948