LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4646g00028	ATGGGACTGTGTCATGGAAAACCGAACGAAATCCCGCAAACGCAAGGAGGAGAAAATCTCTGCGACGAGAAAGAGGGGCTTCCAAATTCTCAAGGAAGGAAATCCACAAACTTTCCCTTTTATAGCCCAAGTCCCTTACCGAGCCTATTCAAGAACTCACCTGCCATCTCGAGCGTGAGCTCAACACCTTTACGCATCTTCAGGCGCCCATTTCCTCCTCCTTCGCCGGCTAAACACATTCGGTCATTGCTTGCTCGAAGGCATGGTTCTGTGAAGCCAAACGAGGCCTCCATCCCCGAAGGAAGCGAGTGCCTCGTTGGACTCGACAAGAGTTTCGGGTTTTCGAAGCAGTTCCTAGCTCATTACGACATTGGAGAAGAAGTGGGACGTGGCCATTTTGGATACACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTGAAGGGGCAGGATGTGGCAGTCAAAGTCATCCCAAAATCCAAGATGACCACAGCTATTGCTATAGAGGATGTGAGGAGAGAAGTGAAGATGTTGCGGGCTCTAACCGGACATAAGAACCTGGTGCAATTCTACGAGGCCTATGAAGATGATGACAATGTTTATATGGTTATGGAGTTATGCAAAGGAGGTGAACTCCTAGATAGAATACTTTCCAGGGGTGGAAAGTATTCAGAAGAGGACGCCAAGGTTGTTATGATTCAGATATTAAGTGTGGTGGCTTTCTGTCATCTTCAGGGTGTGGTTCATCGGGATCTCAAGCCAGAGAATTTCCTGTTTACATCTAAGGATGAAAACTTAAACTCTACTCTAAAGGCTATTGATTTTGGTCTCTCTGACTATGTAAAGCCAGATGAAAGGTTGAATGATATTGTGGGAAGTGCATACTATGTGGCTCCTGAAGTTTTACATAGATCTTATGGGACTGAAGCAGACATGTGGAGCATCGGTGTAATTGCTTACATTCTATTATGTGGAAGCCGTCCTTTCTGGGCCCGGACTGAATCTGGCATTTTCCGGACTGTCCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCAGTTGATGCTGTAGATTTTGTGAAGAGACTATTGAATAAGGACTACCGTAAGAGATTAACTGCAGCTCAGGCGCTTTGTCATCCATGGCTGGCAAATCATCATGATGATATGAAGATACCTTTGGATGTGATAATCCCCAAGTTTGTTAAGGCTTACACATGCTCATCTTCTTTACGCAAATCAGCACTAGGGGCTCTTGCCAAGACATTAACAGTAGCTCAGCTAGCTTATTTCAGAGAACAATTTACTCAGTTAGGGCCGAATAAAAGTGGATTTATCTCAATGCAGAACTTTAAGACGGCTTTTCTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGAGTCTTGGATTATGTGAACATGATTAGTTCTATCCAATACAGGAAATTAGACTTCGAGGAGTTTTGCTCTGCTGCTATAAGCGTGCACCAGCTAGAGGGTATGGAGACCTGGGAGCAACATGCTAGGCGAGCCTATGAGCTATTTGAAAAGCGTGGAAACAGACCAATTATGATTGAAGAACTAGCCTCGGAACTTGGGCTCAGCCCATCAGTGCCTGTTCATGTGGTTCTGCAAGATTGGATAAGACACGCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGGGTTTCTTCCCGCTCATTTCAGAAGACTTGA	1737	0.4548	MGLCHGKPNEIPQTQGGENLCDEKEGLPNSQGRKSTNFPFYSPSPLPSLFKNSPAISSVSSTPLRIFRRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECLVGLDKSFGFSKQFLAHYDIGEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVKMLRALTGHKNLVQFYEAYEDDDNVYMVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENLNSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSVDAVDFVKRLLNKDYRKRLTAAQALCHPWLANHHDDMKIPLDVIIPKFVKAYTCSSSLRKSALGALAKTLTVAQLAYFREQFTQLGPNKSGFISMQNFKTAFLRSSTDASKDSRVLDYVNMISSIQYRKLDFEEFCSAAISVHQLEGMETWEQHARRAYELFEKRGNRPIMIEELASELGLSPSVPVHVVLQDWIRHADGKLSFLGFVRLLHGVSSRSFQKT	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4646g00028	578	Gene3D	-	407	569	-	-
	Pral4646g00028	578	PANTHER	SERINE/THREONINE-PROTEIN KINASE	109	554	-	-
	Pral4646g00028	578	CDD	STKc_CAMK	121	385	-	-
	Pral4646g00028	578	ProSiteProfiles	EF-hand calcium-binding domain profile.	429	464	IPR002048	GO:0005509
	Pral4646g00028	578	MobiDBLite	consensus disorder prediction	1	38	-	-
	Pral4646g00028	578	ProSiteProfiles	Protein kinase domain profile.	122	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4646g00028	578	Pfam	Protein kinase domain	122	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4646g00028	578	ProSitePatterns	Protein kinases ATP-binding region signature.	128	154	IPR017441	GO:0005524
	Pral4646g00028	578	SMART	serkin_6	122	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4646g00028	578	SUPERFAMILY	Protein kinase-like (PK-like)	113	418	IPR011009	-
	Pral4646g00028	578	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	246	258	IPR008271	GO:0004672\|GO:0006468
	Pral4646g00028	578	SUPERFAMILY	EF-hand	416	569	IPR011992	-
	Pral4646g00028	578	FunFam	Calcium-dependent protein kinase SK5	296	391	-	-
	Pral4646g00028	578	Gene3D	Phosphorylase Kinase; domain 1	115	211	-	-
	Pral4646g00028	578	FunFam	CDPK-related kinase 1	115	210	-	-
	Pral4646g00028	578	FunFam	CDPK-related kinase 1	424	496	-	-
	Pral4646g00028	578	Gene3D	Transferase(Phosphotransferase) domain 1	212	406	-	-
	Pral4646g00028	578	FunFam	CDPK-related kinase 3	114	288	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4646g00028	Pral-Chr4646	132857	138576	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4646g00028	1	576	EF-hand Containing Proteins	AT3G50530	65.723	0.0	837

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Pral4646g00028		Pkinase	2.5e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4646g00028	K13412		-	qsa:O6P43_010056	1003.82