Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00009 ATGAGGGAGGACGACTCGAATTGGTTCTCCGGATGTGAAGAGAGACTTCCTTCCCTGGACGATCTCATGCCTCTCTCCCAAACCCTAATCACGCCTGATCTTGCCATGGCTTTTGACATCCGAAACCCCCACAGCCCTCGCCATCAAATCCCTCAACCCCCACCTCCTTCGAATCCCTTACCTTCTCCCGGCAATCCCACACAACCCAACTCTGCTGAATTTGCCGATTCCGCCGAGCTGGGTTCTGGAACCGCCGGTGAAGAGCCCGCACGTACCCTCAAGCGCCCTCGCCTCGTCTGGACTCCACAACTTCACAAAAGGTTCGTGGATGCCGTCGCTCACTTGGGTATCAAAAATGCTGTGCCCAAAACCATAATGCAGCTGATGAGTGTGGACGGGTTGACCAGGGAAAACGTGGCCAGTCATTTGCAAAAATATCGACTTTATTTGAAGCGCATGCAGGGACTATCCGCCGGTGGGGCCGGCGCCGGCGGCGGTGGAGGCGGAGCTGGTTTGGGCGCCTCCTCCGATCCTGCCACTGATCATCTCTTTGCAAGCGGCCCCGTGCCGCCCCATTTCTTACATCCTGCAGCTAGGTCCAATTCCGACCATTTCTTGCCGTTCGTGCCGGTTCCGGCGGCTCTGCAGCATCACCATCCCCACCAGCAGCATATGGCAGCGGCTGTAGCCGCCGCTGCCCATCCCCACTTGCAGCAGCAGTATCATAGGCAAGTGGGGCATTTTGGGTCGCCGCCGAATGGGAGCTTTGACCATACGTTTCTGACAAGACAGCCTCAACCACTTCATAGGATGGGTCAAGCAATGCAGCACAACCCAGTACTTGGATCTGTAGAGGACATGGAATCGGCTAACGCAGCTGGAGGGAGAAAGGTTCTTACTTTGTTTCCCACTGGAGATGATTGA 924 0.5628 MREDDSNWFSGCEERLPSLDDLMPLSQTLITPDLAMAFDIRNPHSPRHQIPQPPPPSNPLPSPGNPTQPNSAEFADSAELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGAGAGGGGGGAGLGASSDPATDHLFASGPVPPHFLHPAARSNSDHFLPFVPVPAALQHHHPHQQHMAAAVAAAAHPHLQQQYHRQVGHFGSPPNGSFDHTFLTRQPQPLHRMGQAMQHNPVLGSVEDMESANAAGGRKVLTLFPTGDD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00009 307 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 271 IPR044841 GO:0003700|GO:0006355
Pral4646g00009 307 Pfam Myb-like DNA-binding domain 99 147 IPR001005 -
Pral4646g00009 307 MobiDBLite consensus disorder prediction 47 66 - -
Pral4646g00009 307 FunFam Two-component response regulator 91 154 - -
Pral4646g00009 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 151 IPR017930 -
Pral4646g00009 307 MobiDBLite consensus disorder prediction 42 93 - -
Pral4646g00009 307 Gene3D - 92 154 - -
Pral4646g00009 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
Pral4646g00009 307 SUPERFAMILY Homeodomain-like 92 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00009 Pral-Chr4646 45614 48270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00009 1 307 G2-like Transcription Factor Family AT3G10760 56.510 6.69e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4646g00009 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00009 - - qsa:O6P43_006330 419.853