Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4646g00006 ATGGCTGACCCATCACCGCCTCCCGATGCGAGCTCTGTTGATTTTACTGCGCAGATCAATAACATCCCCAAACCACCTATGGATTCTCTTCTTTTCGCCGATGACGACGATGCCTTCTTTTCTGAAGCATTTCCCTCTGATTTTGACTTAGGGTTGGATGGCGATTTCGAGATTAACTTCGACGATCTTGACAATCTTCATCTTCCCTTTAATGTTGACGAATTCCTTTTCGACGACGCATCCCTCACGCCGTCGCAGATTGGTGATGATAGTCATGGCGTCGCTGATTGCGATAACAATCCAACTTCCGACGTCGCTAGGTTTTCGAATCCGGAGTCTTATCCGCCTACTTGTTTAGATTATTCAGGCGATCAGAATCCGCATGGCTCAAATGAGGCTAAAGTCTCGCCGGAGTCTGATTCTTGCGACCGGGAATCTTCAGGTGGGCCCGTTTCGTCCCAGGGTTCGGCTAACGGTGGGTCGGGTGTTTCTGATGTTACGGATTCACCTTCACCGACCCGATACAACAGGGATTTTACATCTCAGGTTATCGTTGATGAGAACGCGAAGTTGGATGAAATCGGAAGGGGCTCTGATTTGAAGAGGAAGATGGAAAACAATGGAGGAAATGCTGAGGCGAGAACTACTAAGCATCGGAGGTCGTCGAGGCCTGTGGAGAATGTGACTCGAGAGCCTGGTGTTAATGTTACCAATGGGGACGACGAGAAAAAGAAGGCCAGGTTGGTGAGGAATCGGGAAAGTGCCCAGCTTTCCAGGCAGAGAAAGAAGCAGTATGTGGAGGAGCTTGAGGAGAAGGTGAAATCAATGCATTCGACTATTGCCGATCTGAGTGGCAAGATATCATTCGTCATGGCCGAGAATGCCACTCTGAGACAGCGACTGAGTGCTGGTGGAATGGGTCCACCACCTCCAGCCCCGGGGACGTATAACCATCCTCCAGTGCCTACCATGCCTTATCCTTGGCTGCCGTATGCGCCGTATGTTGCTAACCCACTAGGGTCCCAGGTTCCTTTGGTACCAATTCCGAGATTAAAGCCTCAGCAACTGGCATCGGCCTCAAAGAGTAAAGTGTCCGAGCGTAAGAAATCTGAGGGTAAAACTAAAAAGGTTGCCAGTGTCTGTTTTCTGGGTTTGCTATTCTTTGTCTTGCTTTTTGGTGGATTGTCTCCCCTTGTGAATGTTAAGTTTAATGGTTTAGTGGACGATACTAATGGGAGGTCGCAGTATGTAAGTGATAGGTTCTATGGTCAGCTCGGAGGGAAAGTCTGGCCCGTAAATGGCCCTATTAATAGGGGGGCTGATGAGAAAGGCCGGAATCTTGGAGAGGAAACACATAAGCAGCTGGACTCACGGCATAAATCGGGTTCAGATGCATTTGTTCATCTGGGCAATACTAGTCAGCCTCTTTTTGCTTCTTTGTATGTTCCTAGGAATGATAAGTTGGTGAAGATTGATGGGAATTTGATAATCAATTCTGTCTTGGCCAGTGAGAAAGCTATGGCATCTGAGACTGATCATATCGCGAGGAATAATAAAAGAGAAACTGGTTTGGCACTTTCTAATTATTGGGATTCTGCATTGGCTATTCCGAAAGTTGGAATAAATAGAGGTGCACATCCTTATTCGTATAGCAGCCCACATGAACAGAGGAAGGCTCTTCCGGATGGTTCAGCTGAAATTTTGAAGGACCATCTGAAGTCTTCATCTGATGGTAAAGTCCAACAGTGGTTCCGGGAAGGTCTTGCTGGGCCTATGTTAAGTTCTGGCATGTGCACAGAAGTTTTCCAATTTGATATCTCATCAACACAAGGGGCTATTGTGCCAGCATCATCAGCAGCCAATGTTTCTGAAGAGAACCACCAGAACGTTACTCGTCTCGGCAAAAGTAGGAATAGAAGAATTCTGCATAGGCTCCCGCTTGCTGGATCCAGCAGCAACGCAAGTGAAGAACGAGGAGGAGGAAATTCACTGAATGACAACTTCCTTGGCAACAAGTCGAAGTCTTCCATGGTGGTTTCCGTGCTTGTTGATCCCAAAGAGGCTGGAGATTTTGATGGAATGATGAAGCCAAAGTCGCTTTCTAGAATATTTGTGGTTGTGCTTGTGGACAGCATCAAGTACGTTACGTACTCGTGTGTTCTCCCTCGCACTTCTCCCCATCGAGTGACTGCTTGA 2196 0.475 MADPSPPPDASSVDFTAQINNIPKPPMDSLLFADDDDAFFSEAFPSDFDLGLDGDFEINFDDLDNLHLPFNVDEFLFDDASLTPSQIGDDSHGVADCDNNPTSDVARFSNPESYPPTCLDYSGDQNPHGSNEAKVSPESDSCDRESSGGPVSSQGSANGGSGVSDVTDSPSPTRYNRDFTSQVIVDENAKLDEIGRGSDLKRKMENNGGNAEARTTKHRRSSRPVENVTREPGVNVTNGDDEKKKARLVRNRESAQLSRQRKKQYVEELEEKVKSMHSTIADLSGKISFVMAENATLRQRLSAGGMGPPPPAPGTYNHPPVPTMPYPWLPYAPYVANPLGSQVPLVPIPRLKPQQLASASKSKVSERKKSEGKTKKVASVCFLGLLFFVLLFGGLSPLVNVKFNGLVDDTNGRSQYVSDRFYGQLGGKVWPVNGPINRGADEKGRNLGEETHKQLDSRHKSGSDAFVHLGNTSQPLFASLYVPRNDKLVKIDGNLIINSVLASEKAMASETDHIARNNKRETGLALSNYWDSALAIPKVGINRGAHPYSYSSPHEQRKALPDGSAEILKDHLKSSSDGKVQQWFREGLAGPMLSSGMCTEVFQFDISSTQGAIVPASSAANVSEENHQNVTRLGKSRNRRILHRLPLAGSSSNASEERGGGNSLNDNFLGNKSKSSMVVSVLVDPKEAGDFDGMMKPKSLSRIFVVVLVDSIKYVTYSCVLPRTSPHRVTA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4646g00006 731 MobiDBLite consensus disorder prediction 195 239 - -
Pral4646g00006 731 CDD bZIP_HY5-like 244 295 - -
Pral4646g00006 731 MobiDBLite consensus disorder prediction 87 181 - -
Pral4646g00006 731 FunFam bZIP transcription factor 49 242 304 - -
Pral4646g00006 731 MobiDBLite consensus disorder prediction 647 668 - -
Pral4646g00006 731 SUPERFAMILY Leucine zipper domain 243 301 IPR046347 GO:0003700|GO:0006355
Pral4646g00006 731 Gene3D - 241 304 - -
Pral4646g00006 731 MobiDBLite consensus disorder prediction 648 668 - -
Pral4646g00006 731 Pfam bZIP transcription factor 243 300 IPR004827 GO:0003700|GO:0006355
Pral4646g00006 731 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 51 727 - -
Pral4646g00006 731 MobiDBLite consensus disorder prediction 96 181 - -
Pral4646g00006 731 Coils Coil 252 286 - -
Pral4646g00006 731 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 304 IPR004827 GO:0003700|GO:0006355
Pral4646g00006 731 SMART brlzneu 239 303 IPR004827 GO:0003700|GO:0006355
Pral4646g00006 731 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4646g00006 Pral-Chr4646 33547 37282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4646g00006 6 731 bZIP Transcription Factor Family AT2G40950 45.695 8.24e-152 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4646g00006 bZIP_1 7.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4646g00006 K25783 - gmx:100127362 687.182