Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4645g00001 ATGGAAGGGAAGGGATGTTGTGTGAGTGTTATTGAGAAGTGTAGGCCGTACATAGCCATGATTTCTCTTCAATTCGGGTATGCCGGCATGAACATCATCACCAAGGTTTCCCTCAACCGAGGTATGAGTCACTATGTTCTTGTCGTTTACCGGCACGCCTTCGCCACCGCCGCCGTTGCTCCCTTCGCTCTTGTTCTTGAGAGGAAAGTGAGGCCCAAGATCACATTCCTCGTTTTCATGCAAATTCTCGTTCTCGGACTTCTTGGGCCTGTGATTGATCAAAATCTGTACTACGCGGGCTTGAAGTTAACTACCCCAACCTATTCATGTGCTATAAGCAACATGCTCCCCGCACTGACATTTCTCATGGCAGTTATCTGCAGGATGGAGAAGGTAGACTTCAGAAAAGTACGATGTCAGGCGAAGGTGATTGGGACGATAGTCACAGTTACGGGGGCTATGTTAATGACACTGTACAAGGGCCAAGTCATAAACTTTTTCTGGTCTCATTACATGCGTCACCCCAGAGACTATACTCCTTCTACGGCCACTGATTCTGGGGGAAAAGACTGGTTTAAGGGTTCTATTCTGCTCATAATTGCGACCCTTGCCTGGTCTTCTTTCTTCATCCTTCAGGCAGTGACGTTAAGGACATACCCGGCTCAGCTATCCCTCACATCACTGGTGTGTTTCATGGGTACACTGCAATCAATTGCGGTCACGTTTGTGATGGAACATAATCCCTCTGTTTGGAGAATTGGGTGGGACATGAATCTGCTAGCCGCGGCCTATGCGGGTATAGTATCGTCAGGCATTGCCTATTACGTTCAGGGGGTTGTGATGCAGAGAAGAGGGCCCGTTTTCGTGACTGCTTTCAGCCCTTTGATGATGATCATTGTAGCTATCATGGGCTCTTTCATCCTGGCCGAAAATATCTACTTTGGAGGAGTGATAGGGGCTGTGCTGATCGTAGTGGGTCTGTACTCGGTTCTGTGGGGAAAGTACAAGGAGAACAAGGAGAAAGAAGAGGCAGAGACAATCTCAGAGGCAATAAAAGGATGTTCAGAAAATGGAAGGATGGCACAAGTGAAGGAAGATATTGAAGCAAACCCTGTTGAAATGCAAAAGGTTGAAGGCCCTGTGGTTATAGCTATTAGTGTTCCCAAAGCTTAA 1173 0.474 MEGKGCCVSVIEKCRPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAVAPFALVLERKVRPKITFLVFMQILVLGLLGPVIDQNLYYAGLKLTTPTYSCAISNMLPALTFLMAVICRMEKVDFRKVRCQAKVIGTIVTVTGAMLMTLYKGQVINFFWSHYMRHPRDYTPSTATDSGGKDWFKGSILLIIATLAWSSFFILQAVTLRTYPAQLSLTSLVCFMGTLQSIAVTFVMEHNPSVWRIGWDMNLLAAAYAGIVSSGIAYYVQGVVMQRRGPVFVTAFSPLMMIIVAIMGSFILAENIYFGGVIGAVLIVVGLYSVLWGKYKENKEKEEAETISEAIKGCSENGRMAQVKEDIEANPVEMQKVEGPVVIAISVPKA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4645g00001 390 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Pral4645g00001 390 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Pral4645g00001 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Pral4645g00001 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Pral4645g00001 390 PANTHER WAT1-RELATED PROTEIN 16 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4645g00001 Pral-Chr4645 7871 9917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4645g00001 1 388 Nodulin-like Gene Family AT5G07050 63.728 1.65e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4645g00001 - - gmx:100793545 590.882