Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00055 ATGTCAGAGATAACGAATGTGGGAGGTGTTGAGGACAGAAAGATGAAGCGCAGGCTTGAGGAGCCGGCGGACCGGGAAGAACATGAAACTGAGGAACATTTTCTGTCTCTGAGACTCGGCAACAACGCCGACATGTCGAAACCTTTGAAGGTGTCGAAACCTTCTGGTGGTTTTGGCAATCATCAGAGACCAGAAGGAAGGAGGAAGGAGTTTAAGTGCAGGTACTGCATGAAGAAGTTCAAAAGCTCGCAGGCTCTGGGAGGTCACCAGAATGCACACAGGAGAGAGAGAGTTATCTGGAGGATGGAGAAGGAGCTCAGTACTTTTGGACACCCTCATTTGTGTCCCTGTTCCTCCATTATCACTAACAATAATCTTCCCATATTACCCTCTCGTGCTTCTTCTTCAGCCTTCAACCCTCATTTTCATCACCATCAGAGTCACTGTCATGTGCCTTATTGGACTCAATATCATCAAGGCCAACCCAAACCTAGTTTACCCTATGTGATGAACACTTCTGGGAATCGAAATGTTGAGGGAAAGAAGCCTGCTGTATCCTCCTCATCAGGTCTCGACTTGTCCCTCAAACTCTGA 594 0.4747 MSEITNVGGVEDRKMKRRLEEPADREEHETEEHFLSLRLGNNADMSKPLKVSKPSGGFGNHQRPEGRRKEFKCRYCMKKFKSSQALGGHQNAHRRERVIWRMEKELSTFGHPHLCPCSSIITNNNLPILPSRASSSAFNPHFHHHQSHCHVPYWTQYHQGQPKPSLPYVMNTSGNRNVEGKKPAVSSSSGLDLSLKL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00055 197 ProSitePatterns Zinc finger C2H2 type domain signature. 73 93 IPR013087 -
Pral4644g00055 197 PANTHER ZINC FINGER PROTEIN 4-LIKE 19 197 - -
Pral4644g00055 197 MobiDBLite consensus disorder prediction 173 197 - -
Pral4644g00055 197 MobiDBLite consensus disorder prediction 9 35 - -
Pral4644g00055 197 MobiDBLite consensus disorder prediction 1 66 - -
Pral4644g00055 197 Pfam C2H2-type zinc finger 71 96 - -
Pral4644g00055 197 Gene3D Classic Zinc Finger 50 108 - -
Pral4644g00055 197 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Pral4644g00055 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 71 98 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00055 Pral-Chr4644 247242 247835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00055 60 113 C2H2 Transcription Factor Family AT5G25160 50.000 2.35e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00055 - - pcin:129305583 261.151