Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00041 ATGGAGAACAGTTTGGGTCAAGACTCTAATCCAGCACATGGGTCCTTTGATAAGTCCAGGGTTTTGAATGTTAAGCCATTGCGAACTCTTGTTCCTATATTCCCTTCACCATCTAATGCTTCTTCGTCTTCAAATTCACAAGGCGGGGCACCCTTTGTTTCAGTCTCTCCGTCTGGCCCCTTTCCCCCGGGCGTTTCCTCCTTCTACCCGTTCTTCTTCTCCCCGGAGTCTCAGAGATTCTCTGAACAAAATCTTCAAACCCCAGCAGCTGGTGTGCCTGCGGTTCCACTTAATTCATTTAGGACACCAACGCCAAGAGCTAAGGCTACTACTAATGGAGTTGCCGGTTCATCTGGAAGACGCAAGAAGGGTTTGACGAATGATGATGGCTATAGTAATAGCCAAATCAATTTTGAGGTGAATGAAACAGATGCGGAAGATGGAAGCCAGGATGGAAGGCTTAGATCGCATAAGAAGAAAAAAGGAAGGCAGGGAGGTGGCTCTGCAGCAGTGGAGGTTGATGTGGATGCGGTAGCAAATGATGTTCTCAAGTCAGTTAATCCTATTGTTTTCGATGTCTTGAATCAACCAGATGGTGGCAAAGACTCAGTTTCATATACACTTATGATATATGAAGTGTTAAGAAGGAAGATCACACAAATTGAAGATCTGAGAGACGGAAATCCTGGAGTGGCAAGGCGGCCAGATTTGAGGTCAGGCACAATTATGTTGAGTAAAGGGGTTCGGACAAATAGTAAGAAACGTATTGGAGCTGTTCCTGGTGTTGAAATTGGGGATATTTTCTTTTTTAGGATGGAATTGTGTGTGGTGGGGTTGCATGCACCATCTATGGCTGGAATTGATTACATGGGTGTCAAATTCGGTCAAGAAGAGGAGCCATTAGCTGTAAGTATTGTCTCGTCTGGAGGATATGAAGATAATACAGAGGATGGGGATGTTCTGATTTACAGTGGCCAAGGTGGGGCTAATGGAAGTGATCAAAAGCTTGAAAGAGGTAATCTTGCATTGGAAAAGAGTCTGCATCGGAGCAACGAAGTTAGAGTAATTAGAGGTCTCAAGGACATTACTAACCCTATGGGGAGGATATATGTGTATGATGGTCTTTACAAGATCCAACACTCATGGGTAGAAAAAGGAAAATCAGGTTTCAGTGTATTTAAGTATAAATTAGTCAGGCTGCCTGGGCAGCCTGCAGCATACATGACATGGAAATCCATTCAGCAATGGACCGAGAAGTCTACGTCAAGAGTTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAAGGTGCCTGTTTGTCTTGTGAATGATGTTGATAGTGAGAAGGGCCCTGCGTATTTCACCTACTGCCCTTCTCTCAGGAATTTGAAGCCAGCAAATCCCATAGATCAATCTGCTGGATGTAATTGTGTTGGTGGATGCCGTGCCAGCAACTTCTGTTCTTGCATTCAAAAGAATGGAGGTCATCTCCCCTTTTCTGCAAATGGGGTACTCTTGGACTTAAAATCGGTGATATATGAGTGTGGTCCTTCCTGTCAGTGCCCGCCAACTTGTCGAAACAGGGTTTCTCAAGGTGGCTTGAGAGTTCGCTTGGAGGTTTTTAAAACCAAGAATAAAGGGTGGGGTTTAAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTCGAGTGGAGGAGCTTGGCGTTGAAAATGAAGATGATTACATCTTTGACTCTACTCGCATTTATCAGCAGCTGGAAGTTTTTCCTAGTGAAACAGAAGCTCCAAAGATTCCGTATCCCCTCTATGTAACAGCAAAGAATTATGGGAATGTTGCACGGTTTATGAACCACAGCTGTTCTCCAAATGTATTCTGGCGCCCTGTTGTGCGTGAAAACAAACATGAATCTGATCTCCACATAGCTTTCCATGCAGTCAGACATATCCCTCCCATGACCGAGTTGACATATGATTATGGAATAGTTCTACCTCTCAAAGCTGGCCAGAGGAAAAAGAAATGCCTATGTGGATCAGCAAAATGTAGGGATCACTTTTTTTAA 2097 0.4416 MENSLGQDSNPAHGSFDKSRVLNVKPLRTLVPIFPSPSNASSSSNSQGGAPFVSVSPSGPFPPGVSSFYPFFFSPESQRFSEQNLQTPAAGVPAVPLNSFRTPTPRAKATTNGVAGSSGRRKKGLTNDDGYSNSQINFEVNETDAEDGSQDGRLRSHKKKKGRQGGGSAAVEVDVDAVANDVLKSVNPIVFDVLNQPDGGKDSVSYTLMIYEVLRRKITQIEDLRDGNPGVARRPDLRSGTIMLSKGVRTNSKKRIGAVPGVEIGDIFFFRMELCVVGLHAPSMAGIDYMGVKFGQEEEPLAVSIVSSGGYEDNTEDGDVLIYSGQGGANGSDQKLERGNLALEKSLHRSNEVRVIRGLKDITNPMGRIYVYDGLYKIQHSWVEKGKSGFSVFKYKLVRLPGQPAAYMTWKSIQQWTEKSTSRVGVILPDLTSGAEKVPVCLVNDVDSEKGPAYFTYCPSLRNLKPANPIDQSAGCNCVGGCRASNFCSCIQKNGGHLPFSANGVLLDLKSVIYECGPSCQCPPTCRNRVSQGGLRVRLEVFKTKNKGWGLRSWDPIRAGAFICEYAGEVIDNARVEELGVENEDDYIFDSTRIYQQLEVFPSETEAPKIPYPLYVTAKNYGNVARFMNHSCSPNVFWRPVVRENKHESDLHIAFHAVRHIPPMTELTYDYGIVLPLKAGQRKKKCLCGSAKCRDHFF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00041 698 MobiDBLite consensus disorder prediction 128 143 - -
Pral4644g00041 698 ProSiteProfiles Post-SET domain profile. 682 698 IPR003616 -
Pral4644g00041 698 Pfam SET domain 548 672 IPR001214 GO:0005515
Pral4644g00041 698 Pfam Pre-SET motif 432 529 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4644g00041 698 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 106 691 - -
Pral4644g00041 698 MobiDBLite consensus disorder prediction 80 169 - -
Pral4644g00041 698 Gene3D - 240 421 IPR036987 -
Pral4644g00041 698 ProSiteProfiles YDG domain profile. 257 399 IPR003105 -
Pral4644g00041 698 ProSiteProfiles Pre-SET domain profile. 474 534 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4644g00041 698 Gene3D SET domain 422 698 IPR046341 -
Pral4644g00041 698 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 240 418 - -
Pral4644g00041 698 ProSiteProfiles SET domain profile. 537 672 IPR001214 GO:0005515
Pral4644g00041 698 SMART preset_2 428 521 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4644g00041 698 Pfam SAD/SRA domain 256 403 IPR003105 -
Pral4644g00041 698 SUPERFAMILY PUA domain-like 241 418 IPR015947 -
Pral4644g00041 698 MobiDBLite consensus disorder prediction 34 53 - -
Pral4644g00041 698 SMART G9a_1 252 403 IPR003105 -
Pral4644g00041 698 MobiDBLite consensus disorder prediction 103 117 - -
Pral4644g00041 698 MobiDBLite consensus disorder prediction 1 16 - -
Pral4644g00041 698 SUPERFAMILY SET domain 414 678 IPR046341 -
Pral4644g00041 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 116 698 IPR025794 GO:0016571
Pral4644g00041 698 SMART set_7 537 678 IPR001214 GO:0005515
Pral4644g00041 698 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00041 Pral-Chr4644 184770 188700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00041 10 697 Su(var)3-9 homologs AT1G73100 48.671 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4644g00041 SAD_SRA 1.2e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00041 K24405 - gmx:100805932 986.482