Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00035 ATGGGGCGGACTATGCTGCTCGTATCAGACTTCATTTTGTCATTCATGTGGGTATGCTCAGGGGTTCTGATTAAGCTGGTCGCAAACAAATATCTGGGATTGAGTCGTGAGCCACTCCGTGAGATCGTGAAGATTGCGATCGTCATTGCTAACATGTTCTTCTTTGCGTTTCTCCGAATCATTACCCGTGGGGGCGCCTACAATCCACTCACTGTTTTGGCTAATGCTGTTTCGGGGGATTTAAGCAAATTCCTTTACTGCGTTGCTGTTAGAATTCCTGTTCAGGTGATTGGATCTATTATGGGGGTCAAGCTTATGATTGATACCTTTCCGGAAGTAGGACGGGGACCACGTTTGAATATCGACATTCATCGAGGTGCTCTGATAGAAGGAATCCTAACATTTACAGTTGTTACCATATCACTTCGGCTTGGCACAAAAATCCCTGAAGGTTTCTTCATGAAGACCTGGATCTCCAGTGTCTGCAAGCTAGCACTTCACATATTTGGTTCTGATCTAACTGGTGGTTGTATGAATCCAGCCTCTGTAATGGGGTGGGCTTATGCTCGCGGGGATCACATAACCAAGGAACACTTCGTTGTATACTGGATTGCCCCTATGGAGGCCACTGTACTGGCAGTATGGACCTTCAAATTGTTAGTACGGCCCGTAAAAGAAGACAAATCAAGCGCAAAACATAAATTACAGTGA 711 0.4543 MGRTMLLVSDFILSFMWVCSGVLIKLVANKYLGLSREPLREIVKIAIVIANMFFFAFLRIITRGGAYNPLTVLANAVSGDLSKFLYCVAVRIPVQVIGSIMGVKLMIDTFPEVGRGPRLNIDIHRGALIEGILTFTVVTISLRLGTKIPEGFFMKTWISSVCKLALHIFGSDLTGGCMNPASVMGWAYARGDHITKEHFVVYWIAPMEATVLAVWTFKLLVRPVKEDKSSAKHKLQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00035 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 234 IPR044226 GO:0015267
Pral4644g00035 236 Pfam Major intrinsic protein 7 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4644g00035 236 SUPERFAMILY Aquaporin-like 7 227 IPR023271 -
Pral4644g00035 236 Gene3D Glycerol uptake facilitator protein. 4 234 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00035 Pral-Chr4644 164535 166496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00035 1 236 Major Intrinsic Protein MIP AT3G56950 58.228 7.86e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00035 K09875 - gmx:100786138 356.681