Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00025 ATGGATAGAGGGTATCCTTATTGTTTGCACGAGGCAGTCGCTAGCTTAGTCAGTATAACTATGTATCACGCAAAGAAATTTCCCCCGGGAACTGTCGTGCCAAATAAAGCTCAAGGTGGTGCTGACCAGCTTGCGATTATGACGGATTTGAGTGGATCTGCTGTGAAAAATGCCACACCTGTGGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACTCAACTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTTCTGCGGGTTATGGGCGTGCCTGGACTCACAATTTATCATGTTAAAAGCCACTTGCAGAAATACCGCCTGGCAAAGTACCTGCCAGAATCTTCTGCTGATGAGTCTAAGGATGAGAAACGGAATTCTGGAGACACTGTATCTGGCACTGATTCTTCCCCGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAAGTTCAGAAACGTCTCCATGAACAGTTAGAGGTTCAAAAGCAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAACTAGGTAATTCCTTGAGAGCTTCGGAAACATTACCATCATCGAAAGATGAGCAAGATCCTCTGCAGTCAGAACCTTCAGGTGATGCCTCTGCAGAGACTCAGTCCCCGTTGAAGAAACAGAGAGTTGATGATGGCTCCAAGAATGGCATCATGACCCTCTCAGCTGCCAATAAAGATTGCACAGAAGATTGA 786 0.4631 MDRGYPYCLHEAVASLVSITMYHAKKFPPGTVVPNKAQGGADQLAIMTDLSGSAVKNATPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTVSGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNSLRASETLPSSKDEQDPLQSEPSGDASAETQSPLKKQRVDDGSKNGIMTLSAANKDCTED 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00025 261 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
Pral4644g00025 261 NCBIfam myb-like DNA-binding domain, SHAQKYF class 66 121 IPR006447 GO:0003677
Pral4644g00025 261 MobiDBLite consensus disorder prediction 126 141 - -
Pral4644g00025 261 MobiDBLite consensus disorder prediction 202 234 - -
Pral4644g00025 261 FunFam Myb family transcription factor 65 123 - -
Pral4644g00025 261 Pfam MYB-CC type transfactor, LHEQLE motif 152 198 IPR025756 -
Pral4644g00025 261 SUPERFAMILY Homeodomain-like 65 120 IPR009057 -
Pral4644g00025 261 Gene3D - 65 124 - -
Pral4644g00025 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Pral4644g00025 261 MobiDBLite consensus disorder prediction 126 153 - -
Pral4644g00025 261 MobiDBLite consensus disorder prediction 202 261 - -
Pral4644g00025 261 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 232 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00025 Pral-Chr4644 116885 121352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00025 62 217 G2-like Transcription Factor Family AT4G28610 53.846 8.59e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4644g00025 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00025 - - gmx:100783132 354.369