Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00017 ATGGATCATTACAAGGTTCTAGGTTTGCAGAAGAGCGCCAGTAAAGAAGAAATCAAAGCGGCATTCAAGAAATTGGCCTTCCAGTTCCACCCAGACAAGCATTCGCAATCGTCCAAGGCCGTTAGGGACAATGCCACTCTCAGATTCAAGCAAGTCTCTGAGGCTTATGAGGTCCTCATGGATGATCGGAAGCGTGCGGACTACAATATACGATCGCGGGCTGGCACTGGCAGAAGTGGCTTCTCTGCTGGTGGGAGTAGCGGTTACAACTATTATTACTACTATAGTTATAACTATGGTGGGAAAGGAAACACGAACAATTACAAATATAGCTATAAATCTGGTTCTGGCTTTAGTGTTGGCGGCATGGCGTCCAAGTTTGAGTCAGCTCTTCGGTTTCTGACTACGCGAGCTTTTCTCCTCAATCTTGGCTTTGCTGGAGCTTTCTTAGGAGGGATTGTCATTATTGATTCAAGCCGAGAAGCCATATGGAAGATGCAAAATTCGGGGAAATCCTTCGAAGAAGCCATGGAGACAATTCAGAAAGCGAAAGGCGAGCGACAATGA 567 0.4621 MDHYKVLGLQKSASKEEIKAAFKKLAFQFHPDKHSQSSKAVRDNATLRFKQVSEAYEVLMDDRKRADYNIRSRAGTGRSGFSAGGSSGYNYYYYYSYNYGGKGNTNNYKYSYKSGSGFSVGGMASKFESALRFLTTRAFLLNLGFAGAFLGGIVIIDSSREAIWKMQNSGKSFEEAMETIQKAKGERQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00017 188 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Pral4644g00017 188 PRINTS DnaJ domain signature 64 83 IPR001623 -
Pral4644g00017 188 PRINTS DnaJ domain signature 44 64 IPR001623 -
Pral4644g00017 188 PRINTS DnaJ domain signature 4 22 IPR001623 -
Pral4644g00017 188 PRINTS DnaJ domain signature 22 37 IPR001623 -
Pral4644g00017 188 CDD DnaJ 2 61 IPR001623 -
Pral4644g00017 188 Gene3D DnaJ domain 1 83 IPR036869 -
Pral4644g00017 188 Pfam DnaJ domain 2 69 IPR001623 -
Pral4644g00017 188 SMART dnaj_3 1 64 IPR001623 -
Pral4644g00017 188 SUPERFAMILY Chaperone J-domain 1 99 IPR036869 -
Pral4644g00017 188 PANTHER CO-CHAPERONE PROTEIN DJLA 4 116 - -
Pral4644g00017 188 FunFam DnaJ domain protein 1 88 - -
Pral4644g00017 188 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00017 Pral-Chr4644 86755 88908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00017 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 5.38e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00017 - - qsa:O6P43_006260 212.231