Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4644g00009 | ATGGCGAGCAGAAAGGAAGATGAGAGAAATGAGAAGATTATCAGGGGTCTCATGAAGCTTCCGCCTAATCGAAGATGTATCAACTGCAATAGTCTGGGTCCGCAATATGTCTGTACGACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGCATACATCGTGAGTTTACCCATCGAGTTAAGTCTGTATCAATGGCAAAATTCACTTCTCAGGAAGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGTATGCCAGATAGCAGCAATGTTGACAAAATAAGGGAATTTATAAGGAATGTGTACATTGACAGAAGATATGCTGGAGCAAGGTCCTCTGACAAGCCTCCAAGAGATACGCAGAGTCCTAGAATCCATGGAGATGACACAAGGCGTGCTAGCTCATATCATTCTTATTCTCAGAGTCCGCCATATGATTACCAATATGAGGATCGGCGGTACGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGACAAAGGTCGTTATGAAGGGAAGATATCTAGTATAATGTATAGTCCTGGGCGCTTCAGTGACCATGCATCTGAGGATGGTTTTGCTAATGACGGATCTGGTCCAAGAAATTCGGACTATTCTGTGTCTAATGCTGGTGAACAGTTTAAATCTGCTGTGCAGTCTCCTAAGTTTTATAGGGACATGCGAAGCAGTCCGTTCCATCAACGTTCTAGTGCTGGTTCAAGTGAAGATATATGGTCTCCATCTCGGTATACTTCTTTGGAAACAATCGTCAAGGGTAATTCAGATGGACATCATCCACAGAGAATCACACCACAGGGATCAACCGACTGCAGTTCATCATCCCAGAGATCTTACAGCTCTGGTGGTTTAGATTTTTTTTCAGAGCCTGTCCAAGCTTCTGGATCCAATCAAGATAAGGTGTCTGCCATACCAGTATCGCAACAATCACGTCCAGCAAGATCAGTTAGCTTGGATCTTTCAAAGGTAGCAGTGGCATCTGAGCCATTGTCTTCCTTAACGCCACCTATTGATCTGTTTGAGTTTCCAGCATCATCTCAGGCTCCATCAGTGGATTTGTTTCAACCGTCTATTTTGTCTTCAGCTCTATCTTTGAACCAAAATCAACCTTCACAGGCATCACAGTTCTCATCTATTGACTTCTTCGTGGATGTTTCTAAGCAGCAGTCTGCTGCTCCATCTTTGAACCAAAGTCAACCTTCACAGGCATCCCAGTCTTCACCTATTGACTTCTTTGCGGATGTTCCTGAGCCGCAGCCTGCTGGTCCATCTTCAGCTCCATCGTTGAACCAAAATCAACCTTCGCAGGCATCCCAGTCCTCATCTATTGACTTCTTTGCGGATGTTTCTAAGCAGCAGCCTGCTGCTCCATCAGATGAGAAGTCACCAGAGTTCTTTGTGCCTAAAAATGAAGGATGGGCAACATTTGATGTCCCTCAGCACGCAGCAGCATCTCCTGCACAAGTTGAAATTCCAGCAGGAGTTCCATCAACTGACAAGTCTTTGCTGGAGTTATTTGATCCATTTTCAACTGCAAATGCCAGCAAGCAGTGGCCATCTTTTGACACTTCTGGTGTTCATGAACCTTCAATCACTTCCAATGCATGGCATGGTGGTGTGCAGAATGGAGAACAAGCTTCCGTTACTGCAGCAAATGCTCAACCATGGAATGCATTTGAAGATTCTGGTTCTCACCTTCCTGTAGATACTGCTAGTCAAGGGTTGCAACTGCATAATCTTCCTTCAAGTGGTGATCAGTTTTTAAGCTCAAAAGTTTCTGAGGGCCCCAAAGGTGGGCTGCAAGACTTTGCCCCTATTGGTGCTTTCAATGATAATGTCCAATCAGATGTTGGTGGTTTACCATATCCTCCAACTGCGCTTCCTCTGATGGAAGAGACTCAACGCAGTGCAACCAACCAGAAATCAACTAATCCGTTTGATCTTCCCCACGAATCTGATGTAGAGCACAACAGTATGTTCCTTGATCTGAGCTCATTGCAAGCTGCTCTGCCGGATTCCCCGTTAGCTCCTCCATACAATGGTGGTAATGGTATAGCTGAACCATGGCTCCCTCAAAGTGTGACACCATATATTTCTTCTGCAGGACAAGGTGGTCTAACCTTCATGGCTGCGCAGCCACCTAGCTCTCAAATACCGAACATCCCGACCCAAGGACCAGTTGCATCTTTTGGGGGAAATCCGTTTGCATAG | 2277 | 0.455 | MASRKEDERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRMPDSSNVDKIREFIRNVYIDRRYAGARSSDKPPRDTQSPRIHGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGRYEGKISSIMYSPGRFSDHASEDGFANDGSGPRNSDYSVSNAGEQFKSAVQSPKFYRDMRSSPFHQRSSAGSSEDIWSPSRYTSLETIVKGNSDGHHPQRITPQGSTDCSSSSQRSYSSGGLDFFSEPVQASGSNQDKVSAIPVSQQSRPARSVSLDLSKVAVASEPLSSLTPPIDLFEFPASSQAPSVDLFQPSILSSALSLNQNQPSQASQFSSIDFFVDVSKQQSAAPSLNQSQPSQASQSSPIDFFADVPEPQPAGPSSAPSLNQNQPSQASQSSSIDFFADVSKQQPAAPSDEKSPEFFVPKNEGWATFDVPQHAAASPAQVEIPAGVPSTDKSLLELFDPFSTANASKQWPSFDTSGVHEPSITSNAWHGGVQNGEQASVTAANAQPWNAFEDSGSHLPVDTASQGLQLHNLPSSGDQFLSSKVSEGPKGGLQDFAPIGAFNDNVQSDVGGLPYPPTALPLMEETQRSATNQKSTNPFDLPHESDVEHNSMFLDLSSLQAALPDSPLAPPYNGGNGIAEPWLPQSVTPYISSAGQGGLTFMAAQPPSSQIPNIPTQGPVASFGGNPFA | 758 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4644g00009 | 758 | PRINTS | HIV Rev interacting protein signature | 23 | 42 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | PRINTS | HIV Rev interacting protein signature | 60 | 81 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | PRINTS | HIV Rev interacting protein signature | 42 | 59 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 281 | 331 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 122 | 163 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 446 | 464 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 734 | 758 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 273 | 331 | - | - | |
Pral4644g00009 | 758 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 9 | 122 | IPR037278 | - | |
Pral4644g00009 | 758 | Gene3D | Arf GTPase activating protein | 1 | 131 | IPR038508 | - | |
Pral4644g00009 | 758 | CDD | ArfGap_AGFG | 11 | 121 | - | - | |
Pral4644g00009 | 758 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 11 | 129 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | PANTHER | ARFGAP/RECO-RELATED | 1 | 430 | IPR044820 | GO:0005096 | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 122 | 147 | - | - | |
Pral4644g00009 | 758 | Pfam | Putative GTPase activating protein for Arf | 12 | 122 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 413 | 464 | - | - | |
Pral4644g00009 | 758 | SMART | arf_gap_3 | 11 | 129 | IPR001164 | GO:0005096 | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 413 | 431 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 203 | 224 | - | - | |
Pral4644g00009 | 758 | FunFam | Arf-GAP domain and FG repeat-containing protein 1 | 1 | 134 | - | - | |
Pral4644g00009 | 758 | MobiDBLite | consensus disorder prediction | 734 | 749 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4644g00009 | Pral-Chr4644 | 51602 | 59158 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4644g00009 | 14 | 116 | C2H2 Transcription Factor Family | AT4G05330 | 31.579 | 1.89e-10 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4644g00009 | K15044 | - | gmx:100788316 | 783.482 |