Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00009 ATGGCGAGCAGAAAGGAAGATGAGAGAAATGAGAAGATTATCAGGGGTCTCATGAAGCTTCCGCCTAATCGAAGATGTATCAACTGCAATAGTCTGGGTCCGCAATATGTCTGTACGACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGCATACATCGTGAGTTTACCCATCGAGTTAAGTCTGTATCAATGGCAAAATTCACTTCTCAGGAAGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGTATGCCAGATAGCAGCAATGTTGACAAAATAAGGGAATTTATAAGGAATGTGTACATTGACAGAAGATATGCTGGAGCAAGGTCCTCTGACAAGCCTCCAAGAGATACGCAGAGTCCTAGAATCCATGGAGATGACACAAGGCGTGCTAGCTCATATCATTCTTATTCTCAGAGTCCGCCATATGATTACCAATATGAGGATCGGCGGTACGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGACAAAGGTCGTTATGAAGGGAAGATATCTAGTATAATGTATAGTCCTGGGCGCTTCAGTGACCATGCATCTGAGGATGGTTTTGCTAATGACGGATCTGGTCCAAGAAATTCGGACTATTCTGTGTCTAATGCTGGTGAACAGTTTAAATCTGCTGTGCAGTCTCCTAAGTTTTATAGGGACATGCGAAGCAGTCCGTTCCATCAACGTTCTAGTGCTGGTTCAAGTGAAGATATATGGTCTCCATCTCGGTATACTTCTTTGGAAACAATCGTCAAGGGTAATTCAGATGGACATCATCCACAGAGAATCACACCACAGGGATCAACCGACTGCAGTTCATCATCCCAGAGATCTTACAGCTCTGGTGGTTTAGATTTTTTTTCAGAGCCTGTCCAAGCTTCTGGATCCAATCAAGATAAGGTGTCTGCCATACCAGTATCGCAACAATCACGTCCAGCAAGATCAGTTAGCTTGGATCTTTCAAAGGTAGCAGTGGCATCTGAGCCATTGTCTTCCTTAACGCCACCTATTGATCTGTTTGAGTTTCCAGCATCATCTCAGGCTCCATCAGTGGATTTGTTTCAACCGTCTATTTTGTCTTCAGCTCTATCTTTGAACCAAAATCAACCTTCACAGGCATCACAGTTCTCATCTATTGACTTCTTCGTGGATGTTTCTAAGCAGCAGTCTGCTGCTCCATCTTTGAACCAAAGTCAACCTTCACAGGCATCCCAGTCTTCACCTATTGACTTCTTTGCGGATGTTCCTGAGCCGCAGCCTGCTGGTCCATCTTCAGCTCCATCGTTGAACCAAAATCAACCTTCGCAGGCATCCCAGTCCTCATCTATTGACTTCTTTGCGGATGTTTCTAAGCAGCAGCCTGCTGCTCCATCAGATGAGAAGTCACCAGAGTTCTTTGTGCCTAAAAATGAAGGATGGGCAACATTTGATGTCCCTCAGCACGCAGCAGCATCTCCTGCACAAGTTGAAATTCCAGCAGGAGTTCCATCAACTGACAAGTCTTTGCTGGAGTTATTTGATCCATTTTCAACTGCAAATGCCAGCAAGCAGTGGCCATCTTTTGACACTTCTGGTGTTCATGAACCTTCAATCACTTCCAATGCATGGCATGGTGGTGTGCAGAATGGAGAACAAGCTTCCGTTACTGCAGCAAATGCTCAACCATGGAATGCATTTGAAGATTCTGGTTCTCACCTTCCTGTAGATACTGCTAGTCAAGGGTTGCAACTGCATAATCTTCCTTCAAGTGGTGATCAGTTTTTAAGCTCAAAAGTTTCTGAGGGCCCCAAAGGTGGGCTGCAAGACTTTGCCCCTATTGGTGCTTTCAATGATAATGTCCAATCAGATGTTGGTGGTTTACCATATCCTCCAACTGCGCTTCCTCTGATGGAAGAGACTCAACGCAGTGCAACCAACCAGAAATCAACTAATCCGTTTGATCTTCCCCACGAATCTGATGTAGAGCACAACAGTATGTTCCTTGATCTGAGCTCATTGCAAGCTGCTCTGCCGGATTCCCCGTTAGCTCCTCCATACAATGGTGGTAATGGTATAGCTGAACCATGGCTCCCTCAAAGTGTGACACCATATATTTCTTCTGCAGGACAAGGTGGTCTAACCTTCATGGCTGCGCAGCCACCTAGCTCTCAAATACCGAACATCCCGACCCAAGGACCAGTTGCATCTTTTGGGGGAAATCCGTTTGCATAG 2277 0.455 MASRKEDERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRMPDSSNVDKIREFIRNVYIDRRYAGARSSDKPPRDTQSPRIHGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGRYEGKISSIMYSPGRFSDHASEDGFANDGSGPRNSDYSVSNAGEQFKSAVQSPKFYRDMRSSPFHQRSSAGSSEDIWSPSRYTSLETIVKGNSDGHHPQRITPQGSTDCSSSSQRSYSSGGLDFFSEPVQASGSNQDKVSAIPVSQQSRPARSVSLDLSKVAVASEPLSSLTPPIDLFEFPASSQAPSVDLFQPSILSSALSLNQNQPSQASQFSSIDFFVDVSKQQSAAPSLNQSQPSQASQSSPIDFFADVPEPQPAGPSSAPSLNQNQPSQASQSSSIDFFADVSKQQPAAPSDEKSPEFFVPKNEGWATFDVPQHAAASPAQVEIPAGVPSTDKSLLELFDPFSTANASKQWPSFDTSGVHEPSITSNAWHGGVQNGEQASVTAANAQPWNAFEDSGSHLPVDTASQGLQLHNLPSSGDQFLSSKVSEGPKGGLQDFAPIGAFNDNVQSDVGGLPYPPTALPLMEETQRSATNQKSTNPFDLPHESDVEHNSMFLDLSSLQAALPDSPLAPPYNGGNGIAEPWLPQSVTPYISSAGQGGLTFMAAQPPSSQIPNIPTQGPVASFGGNPFA 758
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00009 758 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Pral4644g00009 758 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Pral4644g00009 758 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Pral4644g00009 758 MobiDBLite consensus disorder prediction 281 331 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 122 163 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 446 464 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 734 758 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 273 331 - -
Pral4644g00009 758 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Pral4644g00009 758 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Pral4644g00009 758 CDD ArfGap_AGFG 11 121 - -
Pral4644g00009 758 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Pral4644g00009 758 PANTHER ARFGAP/RECO-RELATED 1 430 IPR044820 GO:0005096
Pral4644g00009 758 MobiDBLite consensus disorder prediction 122 147 - -
Pral4644g00009 758 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Pral4644g00009 758 MobiDBLite consensus disorder prediction 413 464 - -
Pral4644g00009 758 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Pral4644g00009 758 MobiDBLite consensus disorder prediction 413 431 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 203 224 - -
Pral4644g00009 758 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Pral4644g00009 758 MobiDBLite consensus disorder prediction 734 749 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4644g00009 Pral-Chr4644 51602 59158 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00009 14 116 C2H2 Transcription Factor Family AT4G05330 31.579 1.89e-10 61.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00009 K15044 - gmx:100788316 783.482