Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4644g00008 ATGGGAAGACCTCCTTGCTGTGACAAAGTTGGGATCAAGAAGGGACCATGGACACCTGAGGAGGATATCATCCTTGTTTCTTACATCCAAGAGCATGGCCCAGGAAACTGGAGATCAGTGCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGCTGCAGACTGAGATGGACTAACTACCTCAGGCCAGGAATCAAGAGAGGGAACTTCACACCTCATGAAGAAGGAATGATAATTCATTTGCAGGCGCTTCTGGGAAACAAATGGGCAGCCATAGCTTCGTACCTACCACAAAGAACAGATAATGATATAAAGAATTATTGGAACACACATCTAAAGAAGAAGCTGAAGAAATTTCAAGCAGCCTTGGACCCCCACCTTGTGTCACCGGACTCAACTACGTCTGCTCAGTTTGTATCTAAGACCTTTCATGACAGAACAAGTTTAGATATGAGCAGCACTTCATCTCTTAGGCTTAGTCAGTCTCAGTCTCAGTCACAGTCTCAGTCTCAGTCCTCCTCCTCCACCTATGCCTCAAGCACTGAGAACATCTCACGCCTCTTACAAGGTTGGATGAGATCATCACCAAAGCCGGACACTAATCTTCTCCAAGTAACCAAAGACAAAGAGCTTGAAGACAACAACGTTAACAGCTTCGAAAACAGTAAGCCGATGATGAAGTCTGCATCAGTACCTGCTGCTTTAAATTTTGTGTCCTATCATCATCAAGCAAAAGATGAGAAAGAGGGTGGAGAGATGGTGTCCCATGAAGAGTTCGATTCCATTCTGTCGTTCGAGAACCTTAATAATGCTGCTTGGGACAAGTCCACTTGTGATTCTGTGCATGATAGGAGTTCTGAGGCTGCAGCTGAGAAGGTTTATGATAAACAGAGATCAGATAGCAACAGTGCTCCTCCATTATCGTTCCTTGAGAAGTGGCTGTTTGAGGAAAACGTGGGCCATGAGGAGATGATGGAACTATCCCCTATGTTCTAA 996 0.4498 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPHLVSPDSTTSAQFVSKTFHDRTSLDMSSTSSLRLSQSQSQSQSQSQSSSSTYASSTENISRLLQGWMRSSPKPDTNLLQVTKDKELEDNNVNSFENSKPMMKSASVPAALNFVSYHHQAKDEKEGGEMVSHEEFDSILSFENLNNAAWDKSTCDSVHDRSSEAAAEKVYDKQRSDSNSAPPLSFLEKWLFEENVGHEEMMELSPMF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4644g00008 331 CDD SANT 69 112 IPR001005 -
Pral4644g00008 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pral4644g00008 331 FunFam Transcription factor MYB60 68 138 - -
Pral4644g00008 331 FunFam MYB-related transcription factor 13 66 - -
Pral4644g00008 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4644g00008 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4644g00008 331 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4644g00008 331 CDD SANT 16 61 IPR001005 -
Pral4644g00008 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pral4644g00008 331 MobiDBLite consensus disorder prediction 192 225 - -
Pral4644g00008 331 Gene3D - 13 66 - -
Pral4644g00008 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4644g00008 331 Gene3D - 68 132 - -
Pral4644g00008 331 MobiDBLite consensus disorder prediction 150 179 - -
Pral4644g00008 331 SMART sant 66 114 IPR001005 -
Pral4644g00008 331 SMART sant 13 63 IPR001005 -
Pral4644g00008 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 224 - -
Pral4644g00008 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4644g00008 Pral-Chr4644 48446 50227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4644g00008 1 119 MYB Transcription Factor Family AT5G62470 89.916 8.08e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4644g00008 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4644g00008 K09422 - gmx:100817854 431.024