Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4643g00005 ATGGAGGATCAGGGTTCGGAGAGAAGTGAGAGGGTGACAGTGAGGTCAAGGTGGACTCCCAAGCCGGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGTGGGACCGTCAATCCCTCCAAGGACGAGACCGTCCGAATCAGAAAGCTTCTCGAGAAATTCGGCACCGTCGCCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGCTGCAGCAGCTCGCCGCCGAAGCCGTTCATCCCCAGGCGAATGATCACCAGCTTCAGCCTCATGGCGGTGCAAGTGCATGTCCGCCTCCTTATGATCACCATCATCAGAGTAACCCTGCCTCTGATTCTGCAGCCATGGCGGATTATAATGGCGGCTGCTCCTCCTCTTATCTCGCTTCCCAGGAACCTATGGATCATCATGCTTTCTTTCTCTCCGCCGATCATAATATGGGTTTCCCCGAAATCGATCACACTACTTCTGATTTGAGCTTCCTTTCTGGGAGCATGACGGTGTTTATCAATGGGGTTGCCACAGAGATTCAGAGGGGACCTCTAAACATGAAAACTATGTTTGGTGAAGAGGTGATGTTAGTTCATTCTTCTGGAGTTCCACTTCCTACCAACGAGTTTGGCTTCTTAATGCAGGATTTGCAGGACGGTGAAAGCTACTTTCTGGTCTCAAAGGCAGCGTAG 711 0.526 MEDQGSERSERVTVRSRWTPKPEQILILESIFNSGTVNPSKDETVRIRKLLEKFGTVADANVFYWFQNRRSRSRRRQRQLQQLAAEAVHPQANDHQLQPHGGASACPPPYDHHHQSNPASDSAAMADYNGGCSSSYLASQEPMDHHAFFLSADHNMGFPEIDHTTSDLSFLSGSMTVFINGVATEIQRGPLNMKTMFGEEVMLVHSSGVPLPTNEFGFLMQDLQDGESYFLVSKAA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4643g00005 236 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Pral4643g00005 236 SMART HOX_1 13 80 IPR001356 GO:0003677
Pral4643g00005 236 MobiDBLite consensus disorder prediction 84 123 - -
Pral4643g00005 236 PANTHER WUSCHEL-RELATED HOMEOBOX 11 6 234 IPR044558 GO:0003700|GO:0048830
Pral4643g00005 236 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Pral4643g00005 236 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
Pral4643g00005 236 CDD homeodomain 15 70 IPR001356 GO:0003677
Pral4643g00005 236 FunFam WUSCHEL-related homeobox 11 15 82 - -
Pral4643g00005 236 Gene3D - 15 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4643g00005 Pral-Chr4643 14289 16420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4643g00005 14 232 Wox Gene Family AT3G03660 50.207 5.31e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4643g00005 Homeodomain 9.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4643g00005 - - gmx:100818735 229.95