Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4642g00017 ATGGCAACTTTCTTCTTCTCCAACTCCAAATCTCGTCCCAGAAAACTTGCCACCATTTTCTTCAACATATCCTCCCTCTTCCTCCTCTTTCTCTTTCTCAAGGCCTATCTCTCTCCCTCCAATTCCAATCATGCTCTCAACCGGCATTCCCATGGCCCCTCTGCGACCATCTTTAACCGCGTTCGGACTCTGCCTGACCTCCAAACTAATGCATGCTCCGATCTCCACGAGCATTCAGACCACAGGTCAAAGTGTTCGTACGTCAAGGCCAATCTCAACTGCAATTCCAGAGGGTACATAAATTATCTTCAGATCTTTTACTGCAATCTTGGGCAATTTCCAGTTCTGGCTTATGCTCTGCTTGCTTTATGGCTCGTGGTATTGTTCTATCTCTTGGGCGACACAGCTTCGAACTACTTCTGTCATTCCTTGGAAGCTTTGTCCGGTATCTTGAGGCTGTCGCCGACCATAGCAGGAGTAACATTGCTTTCTCTGGGAAATGGTGCGCCTGATTTTTTTGCCAGTGTTGTTTCCTTCACGAGATCCAGCGGCGGTGCCGTCGGCCTCAATAGCATCCTAGGAGGTGCTCTTTTTGTTACTAGCACTGTTTTGGGGATTATAAGTATTCTGGTCAGCCCAAAGCAGGTTACAGTTGATAAGGTTAGTTTCATTAGAGATGTGGGTTTCCTCCTATTTTCTTTGTTCAGCCTATCGTTGATCATTTACCTCGGTAAAATCAACTTATGGGGTTCAGTCTGCTATATTTCTATCTACTTCCTTTATGTTTGTGCCGTCTCAGTTCCTCATTTCATGAACAAAAGGGAAAAGAAAGAAGAAATTATTGCAGCATTTTCAGACGACTTGGCACTGGCAGAGTCTGCCGTACCAATGTTGGGCTTTGTAGATAGTGAGAAAGGGAAAACAAAAGTAGCAGAGCAAGCAGGAGTTGCTGAAGATGAAATGGAACACCCGGGGAGCTCTGGAAAGGCTTCTCTCAGATGCATATACCTAATCAAGTTTCTGAGAGCACTAGAACTACCACTTTCATTGCCAAGAAGACTAACAATACCAATTGTGAGTGAAGAAAAGTGGTCAAAGCCATATGCAGTGATATCTGTCACATTAGCCCCACTTGTGTTGGCAGCCGTTTGCGATACCCAACTGGTAAACGTGAATAAAAAGAGCAACTTGATCAAGTACTTGCCAGCTGCTATGGTTGGTTTTGTCTTGGGGTGTACAACATGGGTGAAGACGAAGAGCTCAAGTCCACCAAGAAAGTGTTTGTTTCTTTGGCTAGCAGGTGGATTTGCAATGAGTGTATTATGGAATTACATTGTTGCAGATGAATTGGTGTCCCTCTTGTATTCATTAGGACACATAATTGGGGTAAGCCCTTGCATTCTAGGATTAACTGTCCTAGCTTGGGGTAACTCAATGGGGGATTTGATAGCTAATGGTGCAATGGCTCTAAATGGTGGTGAAGATGGGGTTCAGATAGCCATATCAGGTTGCTATGCAGGTCCGATGTTCAATACATTGATGGGTTTGGGGCTGCCTCTTTTTCTATCAGCATGGTCTGAGTATCCATTATCTTATGTGATTCCTAAGGACCAATCCTTATACGAGACTCTTCTGTTCTTGACGGCGGGGCTGCTTTGGGCACTTGTGATATTGCCCAACAAGAACATGAAATTGGATAAGGTTTTGGGAGCTGGCCTTTTGGCCATTTACCTCTGCTTTCTCTTCATCAGGATCGCCTCGGCCATTGTTGTTCTTAAATTATAG 1785 0.4459 MATFFFSNSKSRPRKLATIFFNISSLFLLFLFLKAYLSPSNSNHALNRHSHGPSATIFNRVRTLPDLQTNACSDLHEHSDHRSKCSYVKANLNCNSRGYINYLQIFYCNLGQFPVLAYALLALWLVVLFYLLGDTASNYFCHSLEALSGILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSSGGAVGLNSILGGALFVTSTVLGIISILVSPKQVTVDKVSFIRDVGFLLFSLFSLSLIIYLGKINLWGSVCYISIYFLYVCAVSVPHFMNKREKKEEIIAAFSDDLALAESAVPMLGFVDSEKGKTKVAEQAGVAEDEMEHPGSSGKASLRCIYLIKFLRALELPLSLPRRLTIPIVSEEKWSKPYAVISVTLAPLVLAAVCDTQLVNVNKKSNLIKYLPAAMVGFVLGCTTWVKTKSSSPPRKCLFLWLAGGFAMSVLWNYIVADELVSLLYSLGHIIGVSPCILGLTVLAWGNSMGDLIANGAMALNGGEDGVQIAISGCYAGPMFNTLMGLGLPLFLSAWSEYPLSYVIPKDQSLYETLLFLTAGLLWALVILPNKNMKLDKVLGAGLLAIYLCFLFIRIASAIVVLKL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4642g00017 594 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 25 592 - -
Pral4642g00017 594 Gene3D - 369 587 IPR044880 -
Pral4642g00017 594 Gene3D - 153 294 IPR044880 -
Pral4642g00017 594 Pfam Sodium/calcium exchanger protein 122 264 IPR004837 GO:0016020|GO:0055085
Pral4642g00017 594 Pfam Sodium/calcium exchanger protein 432 585 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4642g00017 Pral-Chr4642 112536 114460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4642g00017 39 593 Antiporters AT5G17860 49.553 3.59e-173 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4642g00017 K13754 - gmx:100818583 706.827