Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4642g00010 ATGGCTGACCCTCGGCGTTCCGTCGTTCGCAACCCTAGACCCTCAGCACCCGCGGCCGCCTCCACCCCTCCCTGTGGAGCCTGCAAGTTCCTCCGCAGGAAGTGCACTGCTGGCTGCATCTTCGCTCCCCACTTTAGCTCCGATCAGGGCTCCGCCCGCTTCGCCGCTGTCCATAAGGTCTTTGGCGCTAGCAATGTCTCTAAGCTCTTGCATCATATCCCCGTCAACCGCCGCCACGAATCCGTGGTTACCATATCCTACGAGGCCCAAGCTCGCTTGTCCGATCCTGTTTATGGCTGTGTTGCCACTATTATTTCTTTGCAACAACAGGTGGCATCTCTGCAAGCAGAGCTGGGGGTGGTTCAAAATCAGCTGATGAATAGCAGGTATGCACTAGCAAGTGCAGTGCAGAGCTCGCAGCAGCAGCAGCAGCCAAGCATGAACATAGGACTCCAGCCAGCGTACTCCAACAACAATTCATGTGCTTCGACAAATCTCATGAACATGAGCAGCAACTTCAGTCCTCCTTGTTTTGACCTTGCGATGGATCAGGCACCACCGCCTTCTTCCCACAGCTTGGACCCTCTTCAATTCTCTCGCTTGTCCCAGGAGGAGGAAGACGATGAACAAGAAAGTAGGATTCCCCATGTTTTCAACCATCAGATCCTTCACCCTTGA 678 0.5442 MADPRRSVVRNPRPSAPAAASTPPCGACKFLRRKCTAGCIFAPHFSSDQGSARFAAVHKVFGASNVSKLLHHIPVNRRHESVVTISYEAQARLSDPVYGCVATIISLQQQVASLQAELGVVQNQLMNSRYALASAVQSSQQQQQPSMNIGLQPAYSNNNSCASTNLMNMSSNFSPPCFDLAMDQAPPPSSHSLDPLQFSRLSQEEEDDEQESRIPHVFNHQILHP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4642g00010 225 Coils Coil 104 124 - -
Pral4642g00010 225 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Pral4642g00010 225 MobiDBLite consensus disorder prediction 1 23 - -
Pral4642g00010 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 21 173 - -
Pral4642g00010 225 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4642g00010 Pral-Chr4642 57982 59186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4642g00010 24 210 AS2 family AT3G03760 62.121 3.70e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4642g00010 LOB 3.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4642g00010 - - qsa:O6P43_006215 275.018