Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4640g00043 ATGGTCTCGGTGGTGTCTTCTCACGGAGTGATCCCTTCCGAACCCACACCAACTGGAATTTTCCCTCTCTCCGATTTCGACCAGATCAGGCTCTCCAGTCACGCCCCTCTCCTTTTTGTTTACAGACCCCATTTCAACGACCACGCCCCCCTTCCTTTCTCCATTCACACTCTCGCCAAATCTCTAAGCCGAGCCCTGGTTCACTTCTATCCCTTCGCCGGTCAGTTACGTGAAATCCAAGGTGGTCGCTTTCAACTCCATTGCAATGCTATGGGAGCTCGGCTCTTAGAAGCAGTTTCGGAGGCCAAGTTGGATGATTTGGGTGATTTCCAGCCAAACCAAGATGTGGAACAGCTCATGCCCAAAATTGATTATCGTCTTCCGCTGGAGGAGATTCCGCTCTTGGTGGTTCAGCTAACCAGATTCCGTTGTGGTGGTCTTACTCTTGGGGTTGCCGTGTCACGTGCTGTGGTTGATGGGGTATCTGCTATGCGTTTCGTGATTTCATGGGCTAGGATAACTAGAGGAGAGGGTTTAGATTTAAGCTCAAGTGAAATGCTACTTCGTGATTCAACTATTTTAGATTCGCGAAAGCCATGTACGGCGCCGCGTTTTGATCATCCTGAGTTTTCTCCTCCACCTCTTTGGGAAGGTAGCTTGGTAGATGCAGAGGATGAGGCTGATACTGCTATTTTGAAGATCACAAAAAATCAAGTTCAAAAACTGAAGGAAAAGGCCAGTAATTTTGGTCCTCCCCGACGGCCCTATACGAGTTTTGAGGTAATCTCTGGGGTGTTGTGGAGATGTGCCTGCAAGGCACGGTATGAAGGAAATGGCAACCAACCAACGAGGCTGTCCACTTTGGTTGACTGTCGAAATCGATTGAGACCACCTCTTCCTAATGCTTTCTTTGGAAATGTAACATTACCCACCGTGACTAAAACTAGTAAGTTTGATGATGTCATGAGTAAACCTGTGAGTTATGCCGTTGGGGAAATAAGACAAGCATTAGAGAAGCTGACAGATTCTTATGTGAGGTCAGCTCTTGATTACATAGCAGGTCAGAACGATGTGAGATTGCTGAGGAACGCTGGTCCTGGAAAATTTAAGGGAAACCCAAATCTAACTCTTGTTAGTTGGATGAATTTTTCATTTCAAGATGCTGATTTTGGGTGGGGAAAACCTGTTTACATGGGACCAGGGAATATTAACTCCGAGGGGAAAGCTTTCTTGATGAATGATGGCGCTGGTGATGGCTTCATTGTAGCCATACGTTTGCAAGCGTCACGTTTGGCAGCTTTCAAGAAGTTGTTCTACGAGGAAGCACGGGGGATGTTACATACTACTTCTAAATTATGA 1359 0.4658 MVSVVSSHGVIPSEPTPTGIFPLSDFDQIRLSSHAPLLFVYRPHFNDHAPLPFSIHTLAKSLSRALVHFYPFAGQLREIQGGRFQLHCNAMGARLLEAVSEAKLDDLGDFQPNQDVEQLMPKIDYRLPLEEIPLLVVQLTRFRCGGLTLGVAVSRAVVDGVSAMRFVISWARITRGEGLDLSSSEMLLRDSTILDSRKPCTAPRFDHPEFSPPPLWEGSLVDAEDEADTAILKITKNQVQKLKEKASNFGPPRRPYTSFEVISGVLWRCACKARYEGNGNQPTRLSTLVDCRNRLRPPLPNAFFGNVTLPTVTKTSKFDDVMSKPVSYAVGEIRQALEKLTDSYVRSALDYIAGQNDVRLLRNAGPGKFKGNPNLTLVSWMNFSFQDADFGWGKPVYMGPGNINSEGKAFLMNDGAGDGFIVAIRLQASRLAAFKKLFYEEARGMLHTTSKL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4640g00043 452 Gene3D - 220 441 IPR023213 -
Pral4640g00043 452 Gene3D - 1 212 IPR023213 -
Pral4640g00043 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 439 - -
Pral4640g00043 452 Pfam Transferase family 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4640g00043 Pral-Chr4640 175374 176887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4640g00043 2 440 Monolignol Biosynthesis Gene Families AT5G48930 36.937 2.69e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4640g00043 K13065 - qsa:O6P43_006188 493.041