Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4640g00004 ATGGATGTTTGCCGGAATGCATCTGTTGCCGGCGACTGCGAACAAGAACAAGTCATCTTGTCTTCCTGCCCAAAGCTTTCTGCCTTCTCAACCACTCTGGACGACCTCTTCTCTTCTCATAACACGGAAGTGGATGTTGGCTTAGAATGGCTTTCTGTATTTGTGGAAGACTGTTTTTCCAGCCCAGCATGTTGCCTCTTGGCACCTACTGATGTTCAAAACACAGAGGCAAACTCTAAACCCTCCGTACAATTACAGAGAACCCAGCAAAAGCAGTCTCCTCTGCAAAATTTTGTGGTGCCAGGAAAGGCAAGAAGCAAGAGGAAAAGGCTTTCAGCCCCTAGAACCAAGGGCCCATTAGGCAGCTGGTCACGCCATTTGAACCCACAAAATGAACCCATAACTTCAGACCCTCCTCTTCTTAAACAGGCCTACTGGTTAGCTGATAGTGAACTCATGGTACCCAAGAAGGAAGATGAGCAAGTAGCAGCAAAGGATGGAGAAGCAGAGCGAGAGGTGGAAGAGAAGAGAACTGTGAGGAAGAAGGAGAGTTTTGAAAGATTAGTCCCAGAGTGTGAAGAAGGCAGCAATGGGCAGAATCAAATGCCGAGAAGGTGTACCCATTGCCTTTCACAGAGGACCCCACAATGGAGGGCCGGACCATTGGGTCCAAAAACACTATGTAATGCATGTGGAGTGAGATACAAGTCCGGTAGATTGCTTCCAGAATATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTACTTGCACTCCAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCTGTTCTGTCTTCTGTTTCTAGTGAGGACTAA 840 0.4738 MDVCRNASVAGDCEQEQVILSSCPKLSAFSTTLDDLFSSHNTEVDVGLEWLSVFVEDCFSSPACCLLAPTDVQNTEANSKPSVQLQRTQQKQSPLQNFVVPGKARSKRKRLSAPRTKGPLGSWSRHLNPQNEPITSDPPLLKQAYWLADSELMVPKKEDEQVAAKDGEAEREVEEKRTVRKKESFERLVPECEEGSNGQNQMPRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVLSSVSSED 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4640g00004 279 ProSiteProfiles GATA-type zinc finger domain profile. 200 236 IPR000679 GO:0006355|GO:0043565
Pral4640g00004 279 ProSitePatterns GATA-type zinc finger domain. 206 231 IPR000679 GO:0006355|GO:0043565
Pral4640g00004 279 PANTHER GATA TRANSCRIPTION FACTOR 15 273 - -
Pral4640g00004 279 Pfam GATA zinc finger 206 240 IPR000679 GO:0006355|GO:0043565
Pral4640g00004 279 MobiDBLite consensus disorder prediction 123 137 - -
Pral4640g00004 279 Gene3D - 196 268 IPR013088 GO:0006355|GO:0008270
Pral4640g00004 279 FunFam GATA transcription factor 196 278 - -
Pral4640g00004 279 SMART GATA_3 200 254 IPR000679 GO:0006355|GO:0043565
Pral4640g00004 279 CDD ZnF_GATA 205 252 IPR000679 GO:0006355|GO:0043565
Pral4640g00004 279 MobiDBLite consensus disorder prediction 77 137 - -
Pral4640g00004 279 MobiDBLite consensus disorder prediction 77 99 - -
Pral4640g00004 279 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 201 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4640g00004 Pral-Chr4640 31515 32884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4640g00004 48 268 C2C2-Gata Transcription Factor Family AT4G32890 40.611 3.42e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral4640g00004 GATA 1.9e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4640g00004 - - pcin:129284700 392.504