Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00037 ATGATGAACCCATTTTCGTCGTCGTCATCCAAGGCCAAAAAGAACCAAACGGCGACAACAAGCACAGCTGCAGAAATGGCAACAACACAAGAGCAGAAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCATGGGGAAGATACGCGGCGGAGATCCGAGACCCTTCCACCAAAGAGAGGCATTGGCTTGGCACCTTCGACACTGCTGAAGAAGCCGCGCTGGCCTACGACAGGGCAGCTCGGTCCATGCGAGGCTCACGTGCCCGAACCAACTTCGTCTACTCCGATACCCCCCCTGGTTCTTCTGTCACCTCCATTATCTCCCCCGATGAACAAACCCACGAGAACCACGACTTCTCGTCTTTCTTCGACCAAAATTCGCTCACCCAACAGTCCTACCCGAATCCTCAACTCTCCGAATGCAACCTCTCCGACAGTTTCATAGCGTTTGCGGATAGTAATGCTTGGTCTTCACCTTCATCCGGGGCTTATAATTATCCACAACATCAAGTTGCAGCGACGGAGGGCCACAACCTAACACATTTCCAACAACTGTATGATGATAGTAACACAGAGCTTCCTCCTTTGCCGCCAGATATTACGAGCTCCGCGGGATACGAAATGGGCAATGAGTTTTACGGTAACGAATTTGGGTACTCGGAGCAGAGCACCGTGACGGAAACAAGCGGGGGATCGAGCTCGTACATGGGTTTTGATTCGGTTGACTACGTGCATAGCCCGATGTTCAGCACAATGCCACCGGCGCCAGATAAGGAGCCGGAGGGCTCTGATTTGGGGAATTCGTCTTATTTCTTCCGAGGTTGA 840 0.5274 MMNPFSSSSSKAKKNQTATTSTAAEMATTQEQKHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQTHENHDFSSFFDQNSLTQQSYPNPQLSECNLSDSFIAFADSNAWSSPSSGAYNYPQHQVAATEGHNLTHFQQLYDDSNTELPPLPPDITSSAGYEMGNEFYGNEFGYSEQSTVTETSGGSSSYMGFDSVDYVHSPMFSTMPPAPDKEPEGSDLGNSSYFFRG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00037 279 Pfam AP2 domain 42 90 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Pral4637g00037 279 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 177 - -
Pral4637g00037 279 MobiDBLite consensus disorder prediction 255 279 - -
Pral4637g00037 279 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Pral4637g00037 279 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 FunFam Ethylene-responsive transcription factor 2 41 99 - -
Pral4637g00037 279 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Pral4637g00037 279 MobiDBLite consensus disorder prediction 1 35 - -
Pral4637g00037 279 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00037 Pral-Chr4637 207989 209295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00037 31 267 AP2-EREBP Transcription Factor Family AT5G13910 45.344 1.86e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4637g00037 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00037 K09286 - qsa:O6P43_009772 295.049