Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00029 ATGTCAAGAAATCTTGCAGCAGCGGTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATACTACTGATATGGTTCTGCCTGTTTCACAAGAGCAGTGTTTCTAGAAATTCAGAGACAGGGTCCTCTGAACCTTCCCAAGTGGGAAGACATGGTGGGATAGAGTTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTTTCACGCTACAAAAAATTTCAGTGACAAAAATCTGATTGGAGAAGGAAAATTTGGGGAGGTTTACAGGGGTTTACTTCATGATGGAATGCTTGTAGCCATCAAAAAGCGCCATGGATTTCCTAGTCAGGAATTTGTAGATGAGGTACACTTCCTCTCATCCTTTCAACATCGAAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATCTACAGTTTCTCATATATGAGTACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGCTCAACAATCACGTGATAAGCTGGAATTCAAGCATAGACTTTCCATAGCTCTGGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTAAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCAGATGCAGGGCTTCGCAACATCCTAGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGCTGCGGCAGATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAGAACATATTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTGGAACTGTTGAGCGGGAGAGAAGCAACTGAATCACCATCTTCAGACTCCAATCAGAATCTAGTTGAATGGGTGCAAAGTAAGCAAGACCCTGGGATTATGTCAGGCATAGTTGACGAAAGAATGGGAAGCAATTATACAGCAGAAGCCATGGAAGAGTTTATGTCACTGATAGTTCCATGTATTGACAGTTCAAGTGAGAGACGACCTGCAATGAGCTATGTGATGATGGAAATTGATCGAATACGTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAAGAACCCCTATTGTGACCCTTGGAAGCCAATTATTTGAAGCTAAAAAAGAATAA 1143 0.4269 MSRNLAAAVGGAAGAVALVGIVILLIWFCLFHKSSVSRNSETGSSEPSQVGRHGGIELTVRDARRFEIEELFHATKNFSDKNLIGEGKFGEVYRGLLHDGMLVAIKKRHGFPSQEFVDEVHFLSSFQHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAAQQSRDKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNILGRVEIAGPSSQAAADEIFLAPEVREFRTYSEKSDVYSFGVFLLELLSGREATESPSSDSNQNLVEWVQSKQDPGIMSGIVDERMGSNYTAEAMEEFMSLIVPCIDSSSERRPAMSYVMMEIDRIREKERNLTTVMGERTPIVTLGSQLFEAKKE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00029 380 ProSiteProfiles Protein kinase domain profile. 78 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4637g00029 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 354 IPR047117 -
Pral4637g00029 380 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Pral4637g00029 380 FunFam Protein kinase superfamily protein 43 150 - -
Pral4637g00029 380 Pfam Protein tyrosine and serine/threonine kinase 82 345 IPR001245 GO:0004672|GO:0006468
Pral4637g00029 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral4637g00029 380 FunFam Protein kinase superfamily protein 151 364 - -
Pral4637g00029 380 SUPERFAMILY Protein kinase-like (PK-like) 63 345 IPR011009 -
Pral4637g00029 380 Gene3D Transferase(Phosphotransferase) domain 1 151 368 - -
Pral4637g00029 380 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00029 Pral-Chr4637 144509 148184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00029 4 373 Receptor kinase-like Gene Family AT3G46290 34.860 1.92e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pral4637g00029 PK_Tyr_Ser-Thr 3.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00029 - - gmx:100820178 565.459