Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00026 ATGTCAAGAAATCTTGCAGCAGCGGTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATACTACTGATATGGTTCTGCCTGTTTCACAAGAGCAGTGTTTCTAGAAATTCAGAGACAGGGTCCTCTGAACCTTCCCAAGTGGGAAGACATGGTGGGATAGAGTTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTTTCACGCTACAAAAAATTTCAGTGACAAAAATCTGATTGGAGAAGGAAAATTTGGGGAGGTTTACAGGGGTTTACTTCATGATGGAATGCTTGTAGCCATCAAAAAGCGCCATGGATTTCCTAGTCAGGAATTTGTAGATGAGGTACACTTCCTCTCATCCTTTCAACATCGAAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATCTACAGTTTCTCATATATGAGTACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGCTCAACAATCACGTGATAAGCTGGAATTCAAGCATAGACTTTCCATAGCTCTGGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTAAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCAGATGCAGGGCTTCGCAACATCCTAGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGCTGCGGCAGATGAAATCTTCCTTGCTCCTGATTTTGGGGTATTTTTGCTGGAACTGTTGAGCGGGAGAGAAGCAACTGAATCACCATCTTCAGACTCCAATCAGAATCTAGTTGAATGGGTGCAAAGTAAGCAAGACCCTGGGATTATGTCAGGCATAGTTGACGAAAGAATGGGAAGCAATTATACAGCAGAAGCCATGGAAGAGTTTATGTCACTGATAGTTCCATGTATTGACAGTTCAAGTGAGAGACGACCTGCAATGAGCTATGTGATGATGGAAATTGATCGAATACGTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAAGAACCCCTATTGTGACCCTTGGAAGCCAATTATTTGAAGCTAAAAAAGAATAA 1098 0.4308 MSRNLAAAVGGAAGAVALVGIVILLIWFCLFHKSSVSRNSETGSSEPSQVGRHGGIELTVRDARRFEIEELFHATKNFSDKNLIGEGKFGEVYRGLLHDGMLVAIKKRHGFPSQEFVDEVHFLSSFQHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAAQQSRDKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNILGRVEIAGPSSQAAADEIFLAPDFGVFLLELLSGREATESPSSDSNQNLVEWVQSKQDPGIMSGIVDERMGSNYTAEAMEEFMSLIVPCIDSSSERRPAMSYVMMEIDRIREKERNLTTVMGERTPIVTLGSQLFEAKKE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00026 365 Pfam Protein tyrosine and serine/threonine kinase 82 327 IPR001245 GO:0004672|GO:0006468
Pral4637g00026 365 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Pral4637g00026 365 Gene3D Transferase(Phosphotransferase) domain 1 248 353 - -
Pral4637g00026 365 ProSiteProfiles Protein kinase domain profile. 78 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4637g00026 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral4637g00026 365 FunFam Protein kinase superfamily protein 43 150 - -
Pral4637g00026 365 FunFam Protein kinase superfamily protein 151 349 - -
Pral4637g00026 365 Gene3D Transferase(Phosphotransferase) domain 1 151 247 - -
Pral4637g00026 365 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 339 IPR047117 -
Pral4637g00026 365 SUPERFAMILY Protein kinase-like (PK-like) 63 330 IPR011009 -
Pral4637g00026 365 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00026 Pral-Chr4637 144509 148186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00026 15 332 Receptor kinase-like Gene Family AT5G56890 32.880 2.26e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pral4637g00026 PK_Tyr_Ser-Thr 8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00026 - - gmx:100820178 528.865