Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00018 ATGGGGGCGCAGTCGTTGAACCGTGTTAGTCCGAATCAGAGTCCTACTGCTAACAGTGAGCTGGGTGCTGGAATGGGTCGTCGGCATTCCGTGGTTTCGACTCCCAGGCGTAATATTGTACCGAATGGTCATAAATGTGGCAAGACTGAAGAGCCAAATGGTTTAAAAAATTCGCCAATTCAGAGAAGAACCAGTCCTCGAATACAAGCCAAGCAAAAAGTGGATACGGAACTTCCAGTGTGCCGCAGAGATGAGCTGCTCGACAAAGCTAGTGATGCGAAGATGACTACCTGTAAAACAAGTGTTAGCTACGAAAATGTTGATAAGCAACAGGTAGTTGGAGGACCAAAGAGAACTAAAAATTTGGATAGTTCAACAACTAAGGAACCGCACGAGTCTAAGGAGCCTTTAATAAAGAGAAGAACTAGCCCTCGTATCCAAGCGAAGCAAAAGTTGGATAAGGCACTTCCAGTGTGCAGTAGGGTGCCGTTGTCCGGTGACCGAGACGATGCTAGTGATATGAAGAAAAATACAACCTGTAAAAGAAATCGGAATGACGAAAATGTGCGTAATGAAAATGCTGTGGAGGACCAACAGAAAGCTAAAAAATTGAACGAGTCAGTTACTGAAGAGCCAAATGAGGACAATGAATCGTCAGCTCAAAGGATAGCTAACTCTCGAGTTCAAAATAAAGAATTTCTAGTGCGACGTAGAGTAGAGCTATTAGAGAACCGAGATAACGTTGGTAATGATAAGAAAATTAAGTGTTTCAAAACAAGTTGCAATGAGGAAAATGGGAATGAACATGGGGGTAAGGAAGAGGGAGTAGGTAAGCCACCTAGAGCAAAGAAGCTGAAAGAGGCTTCCTTGGTTAATAACAGACAGACATCTGCGGGTTCGAAAGCAAATGGGGCAGGGAATTTTGACGATAAAAGTGACTTTCTTAAGGTGAAAGAAACGTTGAGGCTGTTTAACAAGCATTATCTTCAGTTTGTTCAGGAGGAGGAGAAGAGGTGTAACAAAGTGGAATCTTCCCTCAAAGTGTCTAAAGGAGGTTCAAAATCTAAGAAAAAAGCATCAGTTGAAGTTCAAAAGTCAATGGCTAAGCGACCTGATTTGAAAGCACTATCCAAGATGTTAGAAAATCAGGAGACATTGTATTCGGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGCGCTGAAATGGTTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCGAGCTTATTCCAAAGTGTCTCAATACAGTCACTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGAATGTATGAGGATGATATTGATAATGCTGAGGACGTTGTATATACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAGAGCGGGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTGTCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCGGAAAAAGGATTATCTGGGTTTACAGTCTATAAGTTTCGGCTGAGGAGGCTTGATGGGCAGCCAATCTTGACAACCAACCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCAAAGGTGAAGAAGATGTGCCTATTCCTGCCACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCAGAGAGGTCGCTGGATGCAAGTGCAAAGGCTTATGCGTGGATCCTATGTCCTGTGAATGTGCCTTACGAAATGGATCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGGCCAAAGTGTGGATGTGGTCCTGGTTGTGTTAATCGAGCTTCTCAAAAAGGACCAAGATATCGTCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCTGGGGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGCAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAACGAAACATCTACAGCAGGCAAGCTCTTGGACAATTATGCAGATGATAATTCTGAATCCGCACCAGAGTTTTGTATTGATGCCGGCCATATTGGAAATATTGCTCGATTCATCAACCATAGTTGCGAGCCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTAAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGAAAGCGACTATTCTAA 2616 0.427 MGAQSLNRVSPNQSPTANSELGAGMGRRHSVVSTPRRNIVPNGHKCGKTEEPNGLKNSPIQRRTSPRIQAKQKVDTELPVCRRDELLDKASDAKMTTCKTSVSYENVDKQQVVGGPKRTKNLDSSTTKEPHESKEPLIKRRTSPRIQAKQKLDKALPVCSRVPLSGDRDDASDMKKNTTCKRNRNDENVRNENAVEDQQKAKKLNESVTEEPNEDNESSAQRIANSRVQNKEFLVRRRVELLENRDNVGNDKKIKCFKTSCNEENGNEHGGKEEGVGKPPRAKKLKEASLVNNRQTSAGSKANGAGNFDDKSDFLKVKETLRLFNKHYLQFVQEEEKRCNKVESSLKVSKGGSKSKKKASVEVQKSMAKRPDLKALSKMLENQETLYSEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGRAYSKVSQYSHYEFPLAVAIVLSGMYEDDIDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCMEQCVSVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGLSGFTVYKFRLRRLDGQPILTTNQVYFINGRAPQSIAEIRGLVCEDITKGEEDVPIPATNLIDDPPVAPTGFKYKKSILLSKNVKLPREVAGCKCKGLCVDPMSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRASQKGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLIRRTADVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSTAGKLLDNYADDNSESAPEFCIDAGHIGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMTCYCGAADCRKRLF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00018 871 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 231 871 IPR025794 GO:0016571
Pral4637g00018 871 MobiDBLite consensus disorder prediction 1 20 - -
Pral4637g00018 871 Pfam SET domain 702 841 IPR001214 GO:0005515
Pral4637g00018 871 MobiDBLite consensus disorder prediction 122 148 - -
Pral4637g00018 871 MobiDBLite consensus disorder prediction 166 210 - -
Pral4637g00018 871 Coils Coil 191 211 - -
Pral4637g00018 871 MobiDBLite consensus disorder prediction 107 225 - -
Pral4637g00018 871 ProSiteProfiles YDG domain profile. 393 548 IPR003105 -
Pral4637g00018 871 ProSiteProfiles SET domain profile. 691 841 IPR001214 GO:0005515
Pral4637g00018 871 Pfam SAD/SRA domain 392 552 IPR003105 -
Pral4637g00018 871 Gene3D SET domain 572 871 IPR046341 -
Pral4637g00018 871 SUPERFAMILY SET domain 576 848 IPR046341 -
Pral4637g00018 871 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 145 864 - -
Pral4637g00018 871 Gene3D - 376 564 IPR036987 -
Pral4637g00018 871 SMART G9a_1 388 552 IPR003105 -
Pral4637g00018 871 SUPERFAMILY PUA domain-like 375 561 IPR015947 -
Pral4637g00018 871 SMART PostSET_3 855 871 IPR003616 -
Pral4637g00018 871 MobiDBLite consensus disorder prediction 1 76 - -
Pral4637g00018 871 Pfam Pre-SET motif 582 683 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4637g00018 871 SMART preset_2 579 675 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4637g00018 871 ProSiteProfiles Post-SET domain profile. 855 871 IPR003616 -
Pral4637g00018 871 ProSiteProfiles Pre-SET domain profile. 626 688 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4637g00018 871 MobiDBLite consensus disorder prediction 345 366 - -
Pral4637g00018 871 SMART set_7 691 847 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00018 Pral-Chr4637 99479 109571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00018 379 871 EF-hand Containing Proteins AT5G13960 66.397 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4637g00018 SAD_SRA 3.8e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00018 K11420 - qsa:O6P43_006101 929.858