Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4637g00017 | ATGGCTAAGCGACCTGATTTGAAAGCACTATCCAAGATGTTAGAAAATCAGGAGACATTGTATTCGGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGCGCTGAAATGGTTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCGAGCTTATTCCAAAGTGTCTCAATACAGTCACTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGAATGTATGAGGATGATATTGATAATGCTGAGGACGTTGTATATACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAGAGCGGGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTGTCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCGGAAAAAGGATTATCTGGGTTTACAGTCTATAAGTTTCGGCTGAGGAGGCTTGATGGGCAGCCAATCTTGACAACCAACCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCAAAGGTGAAGAAGATGTGCCTATTCCTGCCACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCAGAGAGGTCGCTGGATGCAAGTGCAAAGGCTTATGCGTGGATCCTATGTCCTGTGAATGTGCCTTACGAAATGGATCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGGCCAAAGTGTGGATGTGGTCCTGGTTGTGTTAATCGAGCTTCTCAAAAAGGACCAAGATATCGTCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCTGGGGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGCAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAACGAAACATCTACAGCAGGCAAGCTCTTGGACAATTATGCAGATGATAATTCTGAATCCGCACCAGAGTTTTGTATTGATGCCGGCCATATTGGAAATATTGCTCGATTCATCAACCATAGTTGCGAGCCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTAAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGAAAGCGACTATTCTAA | 1518 | 0.4269 | MAKRPDLKALSKMLENQETLYSEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGRAYSKVSQYSHYEFPLAVAIVLSGMYEDDIDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCMEQCVSVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGLSGFTVYKFRLRRLDGQPILTTNQVYFINGRAPQSIAEIRGLVCEDITKGEEDVPIPATNLIDDPPVAPTGFKYKKSILLSKNVKLPREVAGCKCKGLCVDPMSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRASQKGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLIRRTADVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSTAGKLLDNYADDNSESAPEFCIDAGHIGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMTCYCGAADCRKRLF | 505 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4637g00017 | 505 | SMART | G9a_1 | 22 | 186 | IPR003105 | - | |
Pral4637g00017 | 505 | Pfam | Pre-SET motif | 216 | 317 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pral4637g00017 | 505 | SMART | PostSET_3 | 489 | 505 | IPR003616 | - | |
Pral4637g00017 | 505 | ProSiteProfiles | YDG domain profile. | 27 | 182 | IPR003105 | - | |
Pral4637g00017 | 505 | ProSiteProfiles | SET domain profile. | 325 | 475 | IPR001214 | GO:0005515 | |
Pral4637g00017 | 505 | SUPERFAMILY | SET domain | 209 | 482 | IPR046341 | - | |
Pral4637g00017 | 505 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 505 | IPR025794 | GO:0016571 | |
Pral4637g00017 | 505 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 3 | 498 | - | - | |
Pral4637g00017 | 505 | Pfam | SET domain | 336 | 475 | IPR001214 | GO:0005515 | |
Pral4637g00017 | 505 | Pfam | SAD/SRA domain | 26 | 186 | IPR003105 | - | |
Pral4637g00017 | 505 | Gene3D | - | 11 | 198 | IPR036987 | - | |
Pral4637g00017 | 505 | ProSiteProfiles | Post-SET domain profile. | 489 | 505 | IPR003616 | - | |
Pral4637g00017 | 505 | SMART | set_7 | 325 | 481 | IPR001214 | GO:0005515 | |
Pral4637g00017 | 505 | SUPERFAMILY | PUA domain-like | 9 | 195 | IPR015947 | - | |
Pral4637g00017 | 505 | ProSiteProfiles | Pre-SET domain profile. | 260 | 322 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pral4637g00017 | 505 | Gene3D | SET domain | 206 | 505 | IPR046341 | - | |
Pral4637g00017 | 505 | SMART | preset_2 | 213 | 309 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4637g00017 | Pral-Chr4637 | 99479 | 130510 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4637g00017 | 13 | 505 | EF-hand Containing Proteins | AT5G13960 | 66.397 | 0.0 | 697 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Pral4637g00017 | SAD_SRA | 1.5e-49 | CL0178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4637g00017 | K11420 | - | qsa:O6P43_006101 | 869.381 |