Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00017 ATGGCTAAGCGACCTGATTTGAAAGCACTATCCAAGATGTTAGAAAATCAGGAGACATTGTATTCGGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGCGCTGAAATGGTTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCGAGCTTATTCCAAAGTGTCTCAATACAGTCACTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGAATGTATGAGGATGATATTGATAATGCTGAGGACGTTGTATATACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAGAGCGGGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTGTCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCGGAAAAAGGATTATCTGGGTTTACAGTCTATAAGTTTCGGCTGAGGAGGCTTGATGGGCAGCCAATCTTGACAACCAACCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCAAAGGTGAAGAAGATGTGCCTATTCCTGCCACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCAGAGAGGTCGCTGGATGCAAGTGCAAAGGCTTATGCGTGGATCCTATGTCCTGTGAATGTGCCTTACGAAATGGATCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGGCCAAAGTGTGGATGTGGTCCTGGTTGTGTTAATCGAGCTTCTCAAAAAGGACCAAGATATCGTCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCTGGGGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGCAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAACGAAACATCTACAGCAGGCAAGCTCTTGGACAATTATGCAGATGATAATTCTGAATCCGCACCAGAGTTTTGTATTGATGCCGGCCATATTGGAAATATTGCTCGATTCATCAACCATAGTTGCGAGCCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTAAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGAAAGCGACTATTCTAA 1518 0.4269 MAKRPDLKALSKMLENQETLYSEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGRAYSKVSQYSHYEFPLAVAIVLSGMYEDDIDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKNCMEQCVSVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGLSGFTVYKFRLRRLDGQPILTTNQVYFINGRAPQSIAEIRGLVCEDITKGEEDVPIPATNLIDDPPVAPTGFKYKKSILLSKNVKLPREVAGCKCKGLCVDPMSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRASQKGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLIRRTADVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSTAGKLLDNYADDNSESAPEFCIDAGHIGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMTCYCGAADCRKRLF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00017 505 SMART G9a_1 22 186 IPR003105 -
Pral4637g00017 505 Pfam Pre-SET motif 216 317 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4637g00017 505 SMART PostSET_3 489 505 IPR003616 -
Pral4637g00017 505 ProSiteProfiles YDG domain profile. 27 182 IPR003105 -
Pral4637g00017 505 ProSiteProfiles SET domain profile. 325 475 IPR001214 GO:0005515
Pral4637g00017 505 SUPERFAMILY SET domain 209 482 IPR046341 -
Pral4637g00017 505 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 505 IPR025794 GO:0016571
Pral4637g00017 505 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 3 498 - -
Pral4637g00017 505 Pfam SET domain 336 475 IPR001214 GO:0005515
Pral4637g00017 505 Pfam SAD/SRA domain 26 186 IPR003105 -
Pral4637g00017 505 Gene3D - 11 198 IPR036987 -
Pral4637g00017 505 ProSiteProfiles Post-SET domain profile. 489 505 IPR003616 -
Pral4637g00017 505 SMART set_7 325 481 IPR001214 GO:0005515
Pral4637g00017 505 SUPERFAMILY PUA domain-like 9 195 IPR015947 -
Pral4637g00017 505 ProSiteProfiles Pre-SET domain profile. 260 322 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4637g00017 505 Gene3D SET domain 206 505 IPR046341 -
Pral4637g00017 505 SMART preset_2 213 309 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00017 Pral-Chr4637 99479 130510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00017 13 505 EF-hand Containing Proteins AT5G13960 66.397 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4637g00017 SAD_SRA 1.5e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00017 K11420 - qsa:O6P43_006101 869.381