Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00013 ATGTCCATCTTGCCCTCACAAGCTCAGGAATCACCCTCGTCGCGTTCTCAATCTCCGATATCTCCAAACCCTAATCCCCAATATGGAAACCTCTCTCTACCCTGTCATTCTCCCCCATCCATCTCCTCTCCTATCGGTCAAGTTCCATCCGTCGGATCTCGCCGGATCTCCGATTCAACAACTCCCGTCGCTATACCCGACGTTGATTCAGGTCCATCGACTCCAGCTACAGAAGATTCTGGTGGACCTTCCGAAAAGGTGACTGAGTTGGGATCTCCAAGTGGTATGAAGAGTTCACCTCACCAAAACTCCAGAGTACATTCCCAAAGCCAGTCAAGAAGGCGGGCCCCTAGATTATCTCAGTCAGCAGGGAAGATGACAGGAACAGTTTCTTCTCCTGGAGATCTGCAAAATACTAGGTCTTTTAATCCACATGGAAGCACCCCCTCAGCAGGAAGAAAACCTCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCTCCACCACCAAGAAGGCAGCAGAAGAAAAAGCCATACAACAAAGATTTATTTTTACAGGCAAATTACAAATTCGTGGTGTTAGATTCCGGTGACTATTCACCGGAGTCTTTAGACCCAGATAAAATGTTACAGTGGGAAGATATTGTATGTGTGAGGTATTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGTCCGCAAATAACCTCCTGTGGGCATATTTTTTGTTTCCCTTGTATCTTACAATATTTGATGATGGGTGAAGAGGATCACAAGGGTGATTGCTGGAAAAGGTGTCCCTTATGTTTTGTCATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAATGTTAAGCAGTATCAAGTGGGAGATATCGTCGAGTTCAGACTTTTAACTCGAAAAAAGGACTCTTTTACCCTGTCTGATAAAAATAAGGAGACAGAAGTCTCATCACGTGGCGATAATAATTTGTGTGACCCATTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCAATATCGGATCTAGACGGTTGGCTGGCCAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCCTGTGATGTTGGCAAATCGTCTAGGCTTATTGATTGTGGACACCATAAACCATCAACAGTTATGAACAGCACTGATGTTGATAATGAAACCCGGTCTTATGGATCTGGATCTACCTCTACAGATTTCCATGACCAAAGCAAAGGTATAATAATGGATAATTCAAATGCAAGAGCCTGTCCAGCTCAAACTTTGGATGTGGAGAGAAAAGTATTAGATCAAGAAATTAATCTATCTTCTTCCTATGAGGGGAAAAATGAAATTCAAAGGCATCCAAATGGTTCTGGAGATTCAAAGGAGAGTGACTCGTACAATTTTTACCAGGTTGCGGATGGTCAGCATCTCATTCTGCATCCCCTGAACATGAAATGTCTACTTCACCATTATGGAAGCTATGATATGCTTCCACACAGAATAAGTGGAAGGATTTTGCAATTGGAAACAGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTAACAGCAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGCTGCCCTCTGAATCCCTGGCCCCATTCATGGATGAATTGAAGAAGCGTGCAAACCACAGGAAGCAACTGACAAAGAAGGAGCGAAGAGAGAAAATCAAGGCTGAAGCTTCTTCTACGCATTCTATTCCCATACCAACCGGTTCTCGTGATAATTCTCCACCATTCTCCATGGATGATTTTGAAGCTTTGGGAAATTCGGATGTAACATCAAGTCCTCCTGTTGTTGGGGGAAGAAGTTTGTTTTCAAATGTCACAAGACTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTGAACGTTCAAGAAACTGTTGGTCTACATAATCATAATGTTACAACTGAATCTTCTGGCTTGACAGGTCTGAGAAATGTGGAGACATCATCGTTTGCCAATGTTATATCTAGAGCAGAGTCTACTAATAGCTTAAATGCACCCAAGACAAGTGACTTAGGTAAGAAGGGGAAGAAACCAACTAGAGTTCTTATGTCAACAGCTGGGGGCAGGCGCTACTGA 2280 0.4294 MSILPSQAQESPSSRSQSPISPNPNPQYGNLSLPCHSPPSISSPIGQVPSVGSRRISDSTTPVAIPDVDSGPSTPATEDSGGPSEKVTELGSPSGMKSSPHQNSRVHSQSQSRRRAPRLSQSAGKMTGTVSSPGDLQNTRSFNPHGSTPSAGRKPQMVNGNHLLNFHYDPISRPQARGPPPPPPRRQQKKKPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMISAKDLYTIYIENVKQYQVGDIVEFRLLTRKKDSFTLSDKNKETEVSSRGDNNLCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRACDVGKSSRLIDCGHHKPSTVMNSTDVDNETRSYGSGSTSTDFHDQSKGIIMDNSNARACPAQTLDVERKVLDQEINLSSSYEGKNEIQRHPNGSGDSKESDSYNFYQVADGQHLILHPLNMKCLLHHYGSYDMLPHRISGRILQLETVTQSEAMRRRYRYLSHFPLTATFQLCEIDLSEMLPSESLAPFMDELKKRANHRKQLTKKERREKIKAEASSTHSIPIPTGSRDNSPPFSMDDFEALGNSDVTSSPPVVGGRSLFSNVTRLGFAAGHDSPSLNVQETVGLHNHNVTTESSGLTGLRNVETSSFANVISRAESTNSLNAPKTSDLGKKGKKPTRVLMSTAGGRRY 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00013 759 MobiDBLite consensus disorder prediction 91 155 - -
Pral4637g00013 759 Pfam Zinc finger, C3HC4 type (RING finger) 242 288 IPR018957 GO:0046872
Pral4637g00013 759 CDD RING-HC_RNF10 240 297 - -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 1 81 - -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 429 454 - -
Pral4637g00013 759 PANTHER RING FINGER 10 FAMILY MEMBER 72 759 IPR039739 -
Pral4637g00013 759 SMART ring_2 242 288 IPR001841 -
Pral4637g00013 759 ProSiteProfiles Zinc finger RING-type profile. 242 288 IPR001841 -
Pral4637g00013 759 FunFam RING finger protein 10 235 303 - -
Pral4637g00013 759 SUPERFAMILY RING/U-box 241 294 - -
Pral4637g00013 759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 303 IPR013083 -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 490 509 - -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 729 759 - -
Pral4637g00013 759 ProSitePatterns Zinc finger RING-type signature. 257 266 IPR017907 -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 1 193 - -
Pral4637g00013 759 MobiDBLite consensus disorder prediction 608 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00013 Pral-Chr4637 77873 83683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00013 72 692 C3H Transcription Factor Family AT3G26730 53.033 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00013 K26979 - gmx:100798764 996.882