Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4637g00008 ATGGAGAGACACATGCTACCACGAGCTCCCGGCGTCCCTTGGATAGAAGAAGTTGAAGACGCAGCATCTTGGACCAGAACTAACAACGAAGGTGAGTCCAAGGACCAGGACATTGCCTTGGGAGGTCCACTAACGTCCTTCAAATCCATGCTCGAAAGTGAATGGTACATGGATTCTGCTATCAATTCATCTCATCACAATCTCCCTGGTCTCCCAGTTCACCAAGAAACCAGAGATATTGGTTTTTGTTCGAATCCAAATGACAATTTCCTGTTGCAGCCTATAGATTCATCTTCTTGTTCACCGTCATTCACTATCGACCCGGCGCAGTCACAGCCATATTTACCACCCAAATCGTGCTTCCCTTCTCTCTTCAATGCTGTTTGCAACAACCCTTTTGAGAATAATGGCTTCGATTTGGGCTCTGAAAGTGGCTTTCTCGGTCACTTCCAGGGAAACCAGACTTTGAGTTCCCATGTTCTGATGGGATTTTCGGGCCTGAATACTCAACCCCAGATGGGCAACCTCGAGATCAGTTCAAGCAATGAATTCCCAGCAACTAGGCTATTGCCTGCTGCTGACAATGGCATCACAGTTGGTGGAGGATTTAGTCCAATGGGCTTGGAAGGATACGATGGTTCCGGAAATGCTCTGTTTTCTAACAAGGCTAAGGTTCTAAGACCACTTGACGTTTTCCCTCCTGTTGGTGCTCAACCCACTCTCTTTCAGAAGCGAGCTGCGCTTCGCCAAACCTCTGGCGGAGCTGATAAATTGGGTTCTTTAGAAATTTTGCCGTCTGTATTTAATGATTATTCAAACATGGAGAAGAAGAGGAAGCAAGAAGACGGCGAAATCGAAGAAGCCAGCATCGATGCATCTGGCCTAAATTATGATTCTGACGACTTTAATGAGAGTAATAAGGCGGAGGAGAATGGGAATAACGGCGGAAGCAATTCTAATGCAAACAGTACTGTTACGGGGGGAGATCAGAAGGGGAAGAAGAAGGGGTTACCTGCGAAAAATCTCATGGCCGAGAGAAGGCGCAGGAAGAAACTAAATGATAGGCTATACATGCTTCGCTCGGTTGTGCCGAAGATTAGTAAGATGGATAGGGCTTCCATACTTGGGGATGCAATTGACTACTTGAAGGAGCTGCTTCAGCGGATCAACGATCTTCATAATGAGCTGGAGTCAACCCCAACTGGTTCACTGCCACCACCTTCTGCAAATTTCCACCCTTTGACGCCCACTCTCCCAACCCTTCCCTGCAGGGTTAAGGAAGAACTTTGCCCTACTTCCCTGGCGAGCCCTAAGAACCAACCCTCGCGAGTAGAGGTTAGGTTAAGGGAAGGGAGAGCTGTGAACATCCATATGTTTTGTGCCCGCAGACCAGGACTTCTTCTTACGACCTTGAAGGCTTTGGACAGCCTTGGATTGGACATTCAGCAGGCTGTTATCAGTTGTTTCAATGGCTTTGCTTTAGATGTGTTCCGAGCTGAGCAATGCAGGGAAGGCCAGGATGTTGCCCCCGAGCAAATTAGAGCAGTATTGTTGGATTCAGCGGCTTGCCATGGAATGGTGTGA 1584 0.4785 MERHMLPRAPGVPWIEEVEDAASWTRTNNEGESKDQDIALGGPLTSFKSMLESEWYMDSAINSSHHNLPGLPVHQETRDIGFCSNPNDNFLLQPIDSSSCSPSFTIDPAQSQPYLPPKSCFPSLFNAVCNNPFENNGFDLGSESGFLGHFQGNQTLSSHVLMGFSGLNTQPQMGNLEISSSNEFPATRLLPAADNGITVGGGFSPMGLEGYDGSGNALFSNKAKVLRPLDVFPPVGAQPTLFQKRAALRQTSGGADKLGSLEILPSVFNDYSNMEKKRKQEDGEIEEASIDASGLNYDSDDFNESNKAEENGNNGGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLPPPSANFHPLTPTLPTLPCRVKEELCPTSLASPKNQPSRVEVRLREGRAVNIHMFCARRPGLLLTTLKALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVAPEQIRAVLLDSAACHGMV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4637g00008 527 Gene3D - 330 400 IPR036638 GO:0046983
Pral4637g00008 527 Coils Coil 379 399 - -
Pral4637g00008 527 SMART finulus 342 391 IPR011598 GO:0046983
Pral4637g00008 527 Coils Coil 271 291 - -
Pral4637g00008 527 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 229 522 - -
Pral4637g00008 527 CDD ACT_UUR-ACR-like 456 516 - -
Pral4637g00008 527 MobiDBLite consensus disorder prediction 308 329 - -
Pral4637g00008 527 MobiDBLite consensus disorder prediction 278 342 - -
Pral4637g00008 527 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 405 IPR036638 GO:0046983
Pral4637g00008 527 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 385 IPR011598 GO:0046983
Pral4637g00008 527 FunFam BHLH transcription factor 332 400 - -
Pral4637g00008 527 Pfam Helix-loop-helix DNA-binding domain 343 385 IPR011598 GO:0046983
Pral4637g00008 527 CDD bHLH_AtAMS_like 339 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4637g00008 Pral-Chr4637 51594 55527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4637g00008 23 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.510 2.81e-148 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4637g00008 HLH 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4637g00008 - - pcin:129305251 719.153