Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4633g00027 ATGATGGCGATGGTAGACAGCATTGTCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCATCGTCATTTTTGTCTGCAAACCATGGCGCTTCTTTTTATCTTCGCGACCCCGCTTATCCATCAAGGATGGTGACATAGAGAGGCCCCTAGTCATAGATGATGCAAATGCTTTACGTAATCAGAGCAATGAATTGCCCCGAGACTATGATCTTGAGGGTGCGTGCTTTTTCAATGAGGGTCCTTTTCGCTCACCACGACCCCCTGGACTTGTTTCTAAGCAGAGGTTTCCTGCTTCTTCTCCTAATGTGCCTCAAGTTGATAGTTCGGTTTTGGAAGTAACTTCTGATGCTTCAGAAGAAGTTGCATTTGGCCAAACACTCAGGCTTCCCCCAGACCAGTTAGCTGAAATTCAAAGGCATACTAGAGTGAATTTTGAAGAAAATAGATTGGAAGACACCGTGCAAAGAGATATCTTAGATCAAAGAAGTTGCCTCACTCTGGAGATTATCAGTGGTCCTTCTTGTGGAGTTCGTTGTTCTGTACAATCGACAAAACCTTCTCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTATTAATAAAGGACTCAGAAGTGTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTGAATGGAACACTTTTGAATTCTCGGTCAATCAACCATCCAGACACTGGCAACAGGCTTTGGGGTGAGCCATTTGAGCTTGCCAATGGAGATGTTATAACTCTTGGAACAACATCGAAAGTCATTGTCCGTATTGCTTCTCAAAGTAGGCATCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGGAAAAAGCTACCTATGGAAGATGTTTGCTACTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGACGGGGCTGCTAAATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCTAGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTGCATGATGCATCTGATGTTCTTAAAGAGGCATTTTCTCAAACAGAAGCAAACATGAATCACCATTACGAGGGATGTACAGCAACATTGCTTCTGGTGTGGGCTGATGGTGATGGAAATTTCTATGCACAATGTGCTAATGTTGGAGACTCTTCCTGTGTTATGAATGTAAATGGGAAACAGATCAATATGACAAAGGATCATAAGATAGCAAATTATTCTGAAAGACTCCGAATTGAAGAGAGTGGTGAGCCACTGAAAGAGGGGGAAACACGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAGCAACAGGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAAGCAGTGCATATCGATCAAACTAGCCGGGCTTTTGCCATTCTAGCTAGTGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGGTGAGAGAAAGAGACTCCTCACTTGCAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGTTGGGTGAGGCTAGAACACTCAGAACAAAGGATAATACCTCTGTAATTTTTTTAGATTTTGATAATTTCGCTAGATACTCTTGTAAATCTGAGTCCTAG 1722 0.4216 MMAMVDSIVILFLLLMLLLIIVIVIFVCKPWRFFLSSRPRLSIKDGDIERPLVIDDANALRNQSNELPRDYDLEGACFFNEGPFRSPRPPGLVSKQRFPASSPNVPQVDSSVLEVTSDASEEVAFGQTLRLPPDQLAEIQRHTRVNFEENRLEDTVQRDILDQRSCLTLEIISGPSCGVRCSVQSTKPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTGNRLWGEPFELANGDVITLGTTSKVIVRIASQSRHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIVASILSDSLKRERVLSLHDASDVLKEAFSQTEANMNHHYEGCTATLLLVWADGDGNFYAQCANVGDSSCVMNVNGKQINMTKDHKIANYSERLRIEESGEPLKEGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQAVHIDQTSRAFAILASDGLWDVISMKKAIQLVLQVRERDSSLAENSAEKVANFLLGEARTLRTKDNTSVIFLDFDNFARYSCKSES 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4633g00027 573 FunFam Protein phosphatase 2C 70 162 296 - -
Pral4633g00027 573 CDD FHA_PP2C70-like 167 277 - -
Pral4633g00027 573 PANTHER PROTEIN PHOSPHATASE 2C 300 558 IPR015655 GO:0004722|GO:0006470
Pral4633g00027 573 SMART PP2C_4 284 559 IPR001932 -
Pral4633g00027 573 SUPERFAMILY PP2C-like 302 563 IPR036457 -
Pral4633g00027 573 SMART FHA_2 192 244 IPR000253 GO:0005515
Pral4633g00027 573 FunFam Protein phosphatase 2C 70 297 568 - -
Pral4633g00027 573 Pfam Protein phosphatase 2C 300 554 IPR001932 -
Pral4633g00027 573 CDD PP2Cc 301 561 IPR001932 -
Pral4633g00027 573 Gene3D - 162 296 - -
Pral4633g00027 573 SUPERFAMILY SMAD/FHA domain 165 276 IPR008984 GO:0005515
Pral4633g00027 573 ProSiteProfiles PPM-type phosphatase domain profile. 289 561 IPR001932 -
Pral4633g00027 573 Gene3D - 297 570 IPR036457 -
Pral4633g00027 573 Pfam FHA domain 194 269 IPR000253 GO:0005515
Pral4633g00027 573 ProSiteProfiles Forkhead-associated (FHA) domain profile. 193 244 IPR000253 GO:0005515
Pral4633g00027 573 ProSitePatterns PPM-type phosphatase domain signature. 326 334 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4633g00027 Pral-Chr4633 213373 221605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4633g00027 2 562 PP2C-type Phosphatase Gene Family AT5G19280 57.895 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4633g00027 K01090 - qsa:O6P43_003406 848.966