Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4633g00006 ATGGCTTTTGAGAAGCCATATCCAATCTTCTTGTCTCTCTTGCTTGCCTTGCTTTCGCATTCTGTAGCCGCTCAAGATTCCAAGATATCCTCGGGCAGTTTCCTCACTGCAGGGGAAGATGGCTCCTTCTGGCCTTCATCATCTGATGATTATGCATTTGGTTTCAAACAAATTGAGAAAACAAATGGGTTCTTAATAGCCATCTGGTTCAACAAAATTCCAGAGAACACTATCGTCTGGTCAGCCAAGCATGACACGAGTGATGCTGTTGTTGTGCCAAGGGGTTCCAAAGTTGAGATCAAACCAGATGGTTGGCTCCGATTACTTGATATCGAAGGTTCCCAGATTTGGAGTGGTGGCTATTCTGGAAGCAGTGAAGTTGCTTATGCAGAAATGCTCGATACTGGTAACTTTGTGTTGTTTGGTCAAGGATCTAAACGACTGTGGCAAAGCTTTGATCATCCCACCGATACAATTCTACCAGGACAGGTTTTAAACTCTGGTGGTGAAATTGTTTCGCAGTATTCACAAAATAATTTTTCAAGGGGGAACTTTCTGTTTAGACTCCAAGAAGATGGGGATCTTGTACTGTGGACAACCCATTATCCAACCATAGCTATAAATTTTCCCTATTGGGAGTCCAAGGTTCACGGTGATGGCTTCTCACTGGTCTTCAACCAAACAGGCTCTATATTTGTTCAGAGCAGTAATCAAAGTATAGTCGCAAATGTATCATTAAATGCTCCATCCATGCAAGATTTCTATCAAAGAGCTATTATTGATTATGATGGAGTTTTTAAGCACTATATCTATCCCAAGGGTAATAGTTCCAGTACGGGAAGTTGGCCCATGTCCTGGTCAATTCATTCCAACATACCAGAGGATATTTGCTCTGCAATTGCTGAATTTCCAGGAAGTGGAGCTTGTGGATTCAACAGCTACTGTACCTTTGAGGGTGGGATGAAAATTTGCCATTGTCCATATGGTTTTATCTTCACTGATCCAAACGATGTGATGAAAGGATGCAAACAAAACTTTGTTCAACAGAGTTGTGATGGAACTTCTTCGAAAGCACATCTCTTTAATTTGACTGAGATGCAAGATTCATGTTTTCCGCGTTCTAAATATGATTTCTTCAAACCAGTAAGTGAGGATTGGTGTAGACAATCTTGTTTAGATGATTGTCTTTGTGCACATGTTACTTTCATCGACGGGGCATGTTGGAAGGATAGCCTACCTCTCAGAAATGGAAAGATTGACTCGTCATTGGGAGGGAAATCTCTGCTTAAAATAAGAAAAGATAATTATTCTCCTTTGAATCCTGAAATTATTCATGTGAAGAATGATAGATCAAAATTGATTATTATTGGTTCAACGGTTTTAGGAAGTTCTGTATTCTTGAACTTGTTCTTGTTAGTGGCAGTTTGTGTGGTTGTATATTGCTTTGGTCACAATAATCATAGGGAGCCCAAAGTTAGTTCATTTACGTCAAGCATGAATCTTAGAAGTTTCACTTATGGAGAGTTAGTGGAAGGGACAAACGGGTTCACAGAAGAATTGGGTCGTGGTGCATTTTCTACTGTTTACAAAGGTGTTTTGCCAGACATTCCAGGAAACCTTGTTGCTGTTAAAAAACTCAAAACGGTGAATGAAAGTGAGAAGGAATTTGAAGCAGAAGTCAGCGCAATTGGTCAAACACATCATAGGAATCTGGTGCAACTTTTGGGATTTTGCAATGAAGGTGAGCACAGGCTGCTTGTCTATGAATTCATGAGTAAGGGAACTTTGGCAAGTTTTCTTTTTGAAGGCAAAAGGCCAAGCTGGTATCAAAGGGTGCAAATTGCAATAGGAACAGCTAAAGGACTCTTGTACTTGCATGAAGAGTGCAAATCTCAGATTATACATTGTGATATCAAACCTCAAAATGTATTGCTTGATGACTCTTACACGGCTAAAATTTCAGATCTCGGTTTGGCAAAGCTTTTAAAGATTGACCAGACTGTAACTACAACGGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAAAAACAAGCCGATTACCATGAAGGTGGATGTTTATAGCTTTGGAGTTCTATTAGTAGAACTCATTTGTTGCAGAAAGAGCTTTGATGTGAATGTTGAAGATGAGAATAAGATGGTGCTAATAGATTGGGCATATGATTGCTTTCATCACAGGAGATTGGACCTATTAGTGGAAGAAGATAAGGAAGCTCAAATTGACATCAGGAGTGTTGAAGAGTATGTGAAAATCGGTATCTGGTGCGTTCAAGAGGATCCATCAGCAAGACCCTCGATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTGCCAAATCCTCCTAATCTAGCATCCTTTGCAAGTGAATGTTAG 2409 0.4014 MAFEKPYPIFLSLLLALLSHSVAAQDSKISSGSFLTAGEDGSFWPSSSDDYAFGFKQIEKTNGFLIAIWFNKIPENTIVWSAKHDTSDAVVVPRGSKVEIKPDGWLRLLDIEGSQIWSGGYSGSSEVAYAEMLDTGNFVLFGQGSKRLWQSFDHPTDTILPGQVLNSGGEIVSQYSQNNFSRGNFLFRLQEDGDLVLWTTHYPTIAINFPYWESKVHGDGFSLVFNQTGSIFVQSSNQSIVANVSLNAPSMQDFYQRAIIDYDGVFKHYIYPKGNSSSTGSWPMSWSIHSNIPEDICSAIAEFPGSGACGFNSYCTFEGGMKICHCPYGFIFTDPNDVMKGCKQNFVQQSCDGTSSKAHLFNLTEMQDSCFPRSKYDFFKPVSEDWCRQSCLDDCLCAHVTFIDGACWKDSLPLRNGKIDSSLGGKSLLKIRKDNYSPLNPEIIHVKNDRSKLIIIGSTVLGSSVFLNLFLLVAVCVVVYCFGHNNHREPKVSSFTSSMNLRSFTYGELVEGTNGFTEELGRGAFSTVYKGVLPDIPGNLVAVKKLKTVNESEKEFEAEVSAIGQTHHRNLVQLLGFCNEGEHRLLVYEFMSKGTLASFLFEGKRPSWYQRVQIAIGTAKGLLYLHEECKSQIIHCDIKPQNVLLDDSYTAKISDLGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLVELICCRKSFDVNVEDENKMVLIDWAYDCFHHRRLDLLVEEDKEAQIDIRSVEEYVKIGIWCVQEDPSARPSMKQVVQMLEGFMDVPNPPNLASFASEC 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4633g00006 802 SMART serkin_6 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4633g00006 802 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 794 - -
Pral4633g00006 802 CDD B_lectin 29 155 IPR001480 -
Pral4633g00006 802 ProSiteProfiles Protein kinase domain profile. 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4633g00006 802 ProSiteProfiles Bulb-type lectin domain profile. 20 153 IPR001480 -
Pral4633g00006 802 Pfam Protein kinase domain 518 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4633g00006 802 SUPERFAMILY Protein kinase-like (PK-like) 490 784 IPR011009 -
Pral4633g00006 802 CDD STKc_IRAK 520 786 - -
Pral4633g00006 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 214 IPR036426 -
Pral4633g00006 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pral4633g00006 802 SMART blect_4 26 155 IPR001480 -
Pral4633g00006 802 Gene3D Transferase(Phosphotransferase) domain 1 591 797 - -
Pral4633g00006 802 Gene3D - 155 276 IPR036426 -
Pral4633g00006 802 Gene3D Phosphorylase Kinase; domain 1 479 590 - -
Pral4633g00006 802 Gene3D - 20 154 IPR036426 -
Pral4633g00006 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 791 - -
Pral4633g00006 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 153 - -
Pral4633g00006 802 Pfam D-mannose binding lectin 77 165 IPR001480 -
Pral4633g00006 802 FunFam Serine/threonine-protein kinase 156 300 - -
Pral4633g00006 802 ProSitePatterns Protein kinases ATP-binding region signature. 520 545 IPR017441 GO:0005524
Pral4633g00006 802 PIRSF SRK 2 802 IPR024171 GO:0004674
Pral4633g00006 802 FunFam S-receptor-like serine/threonine-protein kinase 484 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4633g00006 Pral-Chr4633 45316 47724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4633g00006 482 785 Receptor kinase-like Gene Family AT1G60800 41.667 1.10e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4633g00006 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4633g00006 - - aip:107638596 913.679