Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4631g00016 ATGGCACTCCTGCAAAATTCACAAGTTGTGTTTCCCAAATGTTTCGCCATTTCAAAACCATCAACCCCCAACTCTCTATTTCTAAAACTGTCACTGTGTCCGATGTTTCCTTCACTATCAACGTCAATTCCTGCCTTATTCCCCACTCTTCGCCGCGACCCATTTTCATTCGTTCGCTGCAGCTGCAACTTCGGCTCCAATTCTTCTGCGGAATTCAACATTTCTTCTCCAGCCAAAGTCTTCATTAAAGGGCTTCCTCTGTCAACTTCTGGAGGACGCTTGGTTAAGGCATTTTCAGAGTTTGGTGAAGTTAGTCAAGTTAAGCTGCTCATGGATAAAGAATCTGGGCAGTTCCTAGGTATTGCATACATTTGGTTTGCGAAGGAAGAGTCTGCACAATTGGCTGTGGAAAAGATGAATGGGAAGTTCTTCGATGGCAGGTTTATTGACGTCAGAATTTTGAAGGCTGGATCATCAAAAAATCGGAGGAACACAGCTCCATACAAGTTTTGA 513 0.4366 MALLQNSQVVFPKCFAISKPSTPNSLFLKLSLCPMFPSLSTSIPALFPTLRRDPFSFVRCSCNFGSNSSAEFNISSPAKVFIKGLPLSTSGGRLVKAFSEFGEVSQVKLLMDKESGQFLGIAYIWFAKEESAQLAVEKMNGKFFDGRFIDVRILKAGSSKNRRNTAPYKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4631g00016 170 Gene3D - 63 166 IPR012677 -
Pral4631g00016 170 SMART rrm1_1 79 152 IPR000504 GO:0003723
Pral4631g00016 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
Pral4631g00016 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Pral4631g00016 170 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 72 163 - -
Pral4631g00016 170 SUPERFAMILY RNA-binding domain, RBD 70 160 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4631g00016 Pral-Chr4631 69188 71693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4631g00016 66 149 Eukaryotic Initiation Factors Gene Family AT1G22760 36.667 1.77e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4631g00016 - - qsa:O6P43_021635 152.525