Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4625g00009 ATGGATACTATTACTTGCGGTTTGGTTGAGAAGTTCCGAGACCTAGTGCTCGACCTAACTTGGGAGCAGCTTCTTTATCTCATTCACTATCGCCGAAACATTCGGCACTTCGATGAACAACTTAAGGAACTCAACCTTAAGAGATGCTCCATACAGCATCGATTAGATGAGGCTACAAACAATTTAGAACAAATTGCAGACGAAGTTGTTCATTGGTTGCTCCAAGTAGATGGGATATCAGTGAAAGTACGAAAGCTTCAAGAAAAGAGCCAGGCAAAAACAGAGTGTAGCATAACTTCATGTCCCAACCCTTGGCTACGCTATAAACTAAGCAAAAAGGCAAAGGAGATTGCACAAGAAGTTGTTGAAATTTGTGGAAAGGGAAACTTTAACAGAGTTTCATATCATATTCCTCCCCCGTCAATGCCAGAATTAACGAACAGAGACAGCAATGAAGGGATTGATTCAAGAGTACCGATTATGAATCAAATTATGGAGGCATTACGGAATCCAAGTGTTAATATGATTGGATTGTGTGGGCTTGGGGGTGTTGGCAAGACCACCATAGCTAGAGAGGTTGAAAAGAAGGTGAAGAATCAAAAGATGTTTGAAAATGTGATCATGGCAATCGTTTCCAAAGAACTGAACGTTGGGAATATTCAAGGCCAGCTTGCTGAGAAGCTGGGTATGCAACTCAATGAAAGAACTGAAGATGTCAGAGCTTCTCGTTTGTGGGAGAGGTTGAAGAAAGAGAAGAATATGCTCCTAATATTGGATGACCTTTGGGAGGAACTTGATTTGCGCAAAGTTGGAATTCCCTTTGTTGATGTTGAAAATTATAGCAGAAAGAATGAAGCTTGCAAAATTTTACTAACTTCAAGGAATAGAAGGCTGCTGTCAGATCTCATGAAATGTCAAGAAATTATCGAAGTGGGTGTTTTGTTAAAGAATGAAGCAGGGGAGTTGTTCAAGACGATTGCCGAATTTTCTATTGAATCAGGCAATCCCAATTTGAAACCTATAGCGTATGAGATTGTTCAAAAGTGCGGAGGCCTGCCACTAGCGATTGCTACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGATGAGTGGAAAGATTACCTTGCCCGATGGAAAAATCATCTAAGGCGAAATAACACAGGAATCAAAGAAGTGGATGCCTCTTTGAAATTGAGCTATGATCTTCTAAGCCAAATGAACAAAACTATTTTCTTGCTTGCTGCCATGTTAACCCATGATCCCTCAATTGAAGACCTACTCATGTACTCTGTGGGGTTAGATATTTTTCAAGGCATAGAGAACATGGAACAAGCCTATGTTGAAATCTCTTCTATTGTAAGTAGGCTAAAATCATTAAACTTATTTCTTGATAGCAGCATTTCTAGTCATCATGTTACAATCCATGACGTCTATCGACATATTGCAATATCAGTTGCACCCCTTGAATTACATGCATTCACTGTGCAGCATAGAAGGTTGACAGAATGGCCAGACAAAAATTACAGGGGAATTTGCTTACAAGAGAGTGACATTAGTGATCTTCCAGAAGAGTTGCATGGTCCAAGATTAGAATTTTTTTTGCTAAATAGCACCAAACATGATTTGGCGATGCCCAGCACGTTTTTCAAATCTTCGAAGGAGCTAAAAGTGTTGGCATTTACCAATGTGCATTTTTCCTCACTGCCATCACTCTGTTTCCTACAAAAACTAAAAACATTGTGTCTACACTCTTGTTTGCTAGAAGATATAACTGAGGTTAGAAGCTTGAAGAATTTGAAAGTTCTAAGCCTTGCTTACTCTAAAATTCAAAGGCTATCAGTTGAATTAGCAGAGCTTACATCTTTACAAATGTTGAATTTGGCACATTGCTCTGAACTCAAAGTGATTCGACGGAAACTCCTATCTAACTTCAAAAAATTGGAGGTTTTGTGGATGGAATACAGCTTTGACCAATGGAAAGTTGAAGGATCTAGCAAAGCTAATGACAATGCGAGTCTTGACGAGCTAAAGGATTTGCCAATCTCTTCTCTCAATATTTATATTCCCAAAGTCTCTATGTTGCCGGAGAACTTGTTCTTAGATATGGATTTGAAGAGGTACAGAATACTCATTGGAAGGCACTGGACACGGTGGGAAGTCAATGATGAAACTTCAAACATATTGGCACTTGAGCTTAAGAGTAATATCCATTTGAAGCCTGGGGTTCGAAAGTTGATGAAAGGAGCTGAAGATTTGTATTTATATGGATGGCTTCAAAATGTTCTTCACGGTCATGATGGAGGGGGATTTCCACGTTTAAGGCATCTCGAGATTCAAAGTGGTAATGATATAAAATCCAATGAAACTTTCAAATCACTTTTCAACAATAAGGTGTTGGTTCCAAAATTAGAGATATTGCGATTATGTGGTTCAATCGGTTTGATTCCATTAATATGGGATGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGAAAAGTTGTGGCTTTGTGAAATTGATGCCCATTCGTGTGCTGAAATCTTTAAACAACTTGGAAGAACTAGAAGTTAGGGACTGTGACACGTTGGAGTTGGTGTTTGATTTTGAAGACTTGAATGATTATAAAGAGGTAGAGTCATCATCAGTGATTGTGCCACTGAAAAAGTTAAAGCTTTATCAATTGCAAAAATTGAAGAATCCAAAGGCATGCTTCGTGATCTTGAAGAGCTTCGAATAG 2751 0.3879 MDTITCGLVEKFRDLVLDLTWEQLLYLIHYRRNIRHFDEQLKELNLKRCSIQHRLDEATNNLEQIADEVVHWLLQVDGISVKVRKLQEKSQAKTECSITSCPNPWLRYKLSKKAKEIAQEVVEICGKGNFNRVSYHIPPPSMPELTNRDSNEGIDSRVPIMNQIMEALRNPSVNMIGLCGLGGVGKTTIAREVEKKVKNQKMFENVIMAIVSKELNVGNIQGQLAEKLGMQLNERTEDVRASRLWERLKKEKNMLLILDDLWEELDLRKVGIPFVDVENYSRKNEACKILLTSRNRRLLSDLMKCQEIIEVGVLLKNEAGELFKTIAEFSIESGNPNLKPIAYEIVQKCGGLPLAIATAAKALRGKNLDEWKDYLARWKNHLRRNNTGIKEVDASLKLSYDLLSQMNKTIFLLAAMLTHDPSIEDLLMYSVGLDIFQGIENMEQAYVEISSIVSRLKSLNLFLDSSISSHHVTIHDVYRHIAISVAPLELHAFTVQHRRLTEWPDKNYRGICLQESDISDLPEELHGPRLEFFLLNSTKHDLAMPSTFFKSSKELKVLAFTNVHFSSLPSLCFLQKLKTLCLHSCLLEDITEVRSLKNLKVLSLAYSKIQRLSVELAELTSLQMLNLAHCSELKVIRRKLLSNFKKLEVLWMEYSFDQWKVEGSSKANDNASLDELKDLPISSLNIYIPKVSMLPENLFLDMDLKRYRILIGRHWTRWEVNDETSNILALELKSNIHLKPGVRKLMKGAEDLYLYGWLQNVLHGHDGGGFPRLRHLEIQSGNDIKSNETFKSLFNNKVLVPKLEILRLCGSIGLIPLIWDDQLSHNSFRNLKTLFVKSCGFVKLMPIRVLKSLNNLEELEVRDCDTLELVFDFEDLNDYKEVESSSVIVPLKKLKLYQLQKLKNPKACFVILKSFE 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4625g00009 916 SUPERFAMILY L domain-like 469 876 - -
Pral4625g00009 916 Coils Coil 27 47 - -
Pral4625g00009 916 Gene3D - 136 312 IPR027417 -
Pral4625g00009 916 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 904 - -
Pral4625g00009 916 SMART AAA_5 172 314 IPR003593 GO:0016887
Pral4625g00009 916 Gene3D - 314 404 IPR042197 -
Pral4625g00009 916 Gene3D Ribonuclease Inhibitor 506 655 IPR032675 -
Pral4625g00009 916 PRINTS Disease resistance protein signature 617 633 - -
Pral4625g00009 916 PRINTS Disease resistance protein signature 248 262 - -
Pral4625g00009 916 PRINTS Disease resistance protein signature 175 190 - -
Pral4625g00009 916 PRINTS Disease resistance protein signature 349 363 - -
Pral4625g00009 916 Pfam NB-ARC domain 161 401 IPR002182 GO:0043531
Pral4625g00009 916 Gene3D Ribonuclease Inhibitor 656 903 IPR032675 -
Pral4625g00009 916 FunFam Probable disease resistance protein At1g61300 139 306 - -
Pral4625g00009 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 412 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4625g00009 Pral-Chr4625 246953 251176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4625g00009 173 464 WRKY Transcription Factor Family AT5G45050 25.753 8.58e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4625g00009 - - pcin:129285257 895.96