Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4625g00008 ATGGCTGATATTATTACTCCAGTCATTGGCATTCTAGATCGTTTGTTCGGTTGCTGCAGCAAATGGACAGATTCAATACGCCGGCTGGGAGACAACCTCAACCCTTTGAGAAGTGCTTCAGAGATACTCAATGGCAGATATCTTGATGTCAAGAGGAAGGTCGAAACGGCAGAGAAGAATCCAGATCCAAAGTTGATGGTTTTGAATGAGGTACGGGTTTGGATGGACGGAGTTGAAAATCTACAAAAAGAAGTTCAGGATATTCTACAACGAGGTGATCAAGAAAAACAAGCTAAGTGTTTTGGTTGTCCCAAGAATTGTCGAGCTAGATACAAGCTACACAAAATGGTCACTCGGAAGTTGAATGACGTTAACCGTCTTCTAAACAGAGGGAATTTTGATCATGTAGCAGAAAAGTGTGCTGGTGATCAGTTCGTTGAACTTCCGGTGGACGAGGCTGTGGGTGTGGAATCAACATTTGAGGAGCTACGTACATGCTTTGAGAACAACCAGGTAGGTGTCATTGGCTTGCATGGAATGGGAGCGGTGGGCAAAACAACTCTACTTAAGAAATTCAACAATGATTTCCTCTCAACAAGAGCAGACTATGTAGTCATCTGGGTTGTGGCGTCTAAAGATGTATATCCAGGAAGAATTCAAGATGCCATTAGAAGGAAATTGCGTGTGGAAGATGATAGTTGGAATAATGCGACAATGGATGAGAGACCCTCTTTGTTACTCAACATCTTGAATAAGAAGAAATTTGTATTGTTATTAGATGATGTGTGGGAAAGAATTGACTTGTGGAAATTGGGGGTTCCTTCCCCTAATAATTGTGAATGCAAGATAATATTCACAACTCGGTCCAAAGAAATATGTGGCCTAATGGGTGCACAGAGACATATAAAAGTAAATTGCCTTCCGCCAGATAGAGCATTTGAGTTGTTCAAGAAGACCGTGGGCACAACAATTCTTGAAAACCCTTATATCTCTGATCTCGCAAAACTAGTGGTGGATGAGTGTCAAGGGTTGCCACTTGCTCTTCGCATTATTGGTCGAGTCATGGTTAATAAGGTGTCTCCAGCTGAATGGAAGCGTGCTATAGAAATTTTGAGGAGTTATCCCTCAAAAATCCAAGTTATGGTTGAAGATGTCTACTGCTTGCTTAAATTTAGTTATGATAGATTGCCAAATGATACCTACAAATTATGTCTTTTGTATTGTGCTCTATTTCCTGAGGACTATAACATTGAAAAGGAAGACCTTGTTTTCCTCTGGACAGCGGAAGGTTATTTGGTTGAATTTGATTATACACACGAGGCACATAAGCATGGAGAAGATATAATTTCAGGATTGAGTTATGCTTGCTTATTGGAAAACGGTGACAAAGAAAACACAATTAAAATGCATGATGTCATTAGAGATATGGCCCTTTGGATAGCATGTGAGGAGCAGGCAAGATTCATTGTAAAAGACGGTTATGGAACTACTGGCCTGGGAGGATTTAGTCATACAAAGTTAAAACAGGTAGAAAAGCTCTCTTTGTGGAGCAATGGTCATATGATTCTAAACCCCCTACAAACACCTCATTGTCCTAATCTCATCACTCTTCTTATTAGGAATACTAGTATAGAGGTCTTTCCAACAGAGGTACTTGTCCTCCCAAATACCATTAGAGTACTGGACTTGTCGTTTAATGATGGAATAAGAAATCTACCATCAGCAATTGGGGACTTCGTAAATCTAGAACACATGAACCTATCCCATACTAATATATCAAAATTGCCAGAGGAGTTCAAGAATTTGAAGAAGCTAAGGTTCTTGTTGCTGGACGGACTTGCAGAGCTTAAATTACCACAGGAAGTTATATCCAGTTTGTTATCTCTTCAAGCCTTCAGTATGAGAGGCTGGAAAGTTCGCGTGATAATGATTGATGAAAATGTATGGTTGCGTGAGGGGGAAGGTGAAAATGTATTGTTGCATGAGCTAGAAGGCTTAAATGATCTTCATTATATACGCATTTCTGTCTCTAGCATATCCTCTGTTAAAAACATACTGAGGTCCCCAAAGTTGCAGATGTGCATGTGTGAGCTATTCATTAAAGCAAACTCATTACTCCCTGACTTGTCCTCATCACTTGGAGAAATGACGCATCTTGAAACATTAAAAGTTATGGGTGTCGTGAAACCAGAGAATTTTGAAGCTGTGAATATTCCAAGGAGCCCATTTCGGGGAAATGAATATAAAATCAGCCTTCGCCAGTTGATTATCTTCGAGTGTCAAAATATACTTGACTTGAATTGGCTTATATATGCTTGTGACCTTGAAGTCCTTGAATTAAGTCGTTGCCATTCATTGAAGGAAGTTATAAGTGCAGACTTTGGGACTATTGGCGCTGAGAATAATCTTTTTTCCAGTCTCACTAATCTTCACCTGGGATCTCTGAGTGACTTACAGAGCATTTGTACAATGGCATTACAGTTTCCTTCTTTGAAGGAGATTCGAGTACAAGAGTGGCCCAATTTGAAGAAGCTCCCATTTAATTCTCAAAGTGTATTGAAGAATCTACAAAGCTTTAAAGGAGAGCATGAGTGGTTGGCTCAATTGCAATGGGAAGATGAAGCTACCAGGCTTCTCCTTTCATCAAAATTTGAAAGGAATTGA 2664 0.399 MADIITPVIGILDRLFGCCSKWTDSIRRLGDNLNPLRSASEILNGRYLDVKRKVETAEKNPDPKLMVLNEVRVWMDGVENLQKEVQDILQRGDQEKQAKCFGCPKNCRARYKLHKMVTRKLNDVNRLLNRGNFDHVAEKCAGDQFVELPVDEAVGVESTFEELRTCFENNQVGVIGLHGMGAVGKTTLLKKFNNDFLSTRADYVVIWVVASKDVYPGRIQDAIRRKLRVEDDSWNNATMDERPSLLLNILNKKKFVLLLDDVWERIDLWKLGVPSPNNCECKIIFTTRSKEICGLMGAQRHIKVNCLPPDRAFELFKKTVGTTILENPYISDLAKLVVDECQGLPLALRIIGRVMVNKVSPAEWKRAIEILRSYPSKIQVMVEDVYCLLKFSYDRLPNDTYKLCLLYCALFPEDYNIEKEDLVFLWTAEGYLVEFDYTHEAHKHGEDIISGLSYACLLENGDKENTIKMHDVIRDMALWIACEEQARFIVKDGYGTTGLGGFSHTKLKQVEKLSLWSNGHMILNPLQTPHCPNLITLLIRNTSIEVFPTEVLVLPNTIRVLDLSFNDGIRNLPSAIGDFVNLEHMNLSHTNISKLPEEFKNLKKLRFLLLDGLAELKLPQEVISSLLSLQAFSMRGWKVRVIMIDENVWLREGEGENVLLHELEGLNDLHYIRISVSSISSVKNILRSPKLQMCMCELFIKANSLLPDLSSSLGEMTHLETLKVMGVVKPENFEAVNIPRSPFRGNEYKISLRQLIIFECQNILDLNWLIYACDLEVLELSRCHSLKEVISADFGTIGAENNLFSSLTNLHLGSLSDLQSICTMALQFPSLKEIRVQEWPNLKKLPFNSQSVLKNLQSFKGEHEWLAQLQWEDEATRLLLSSKFERN 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4625g00008 887 Pfam NB-ARC domain 167 394 IPR002182 GO:0043531
Pral4625g00008 887 SUPERFAMILY L domain-like 468 859 - -
Pral4625g00008 887 FunFam Probable disease resistance protein At1g63360 393 479 - -
Pral4625g00008 887 Gene3D Ribonuclease Inhibitor 492 727 IPR032675 -
Pral4625g00008 887 Gene3D - 393 478 IPR036388 -
Pral4625g00008 887 Gene3D Ribonuclease Inhibitor 737 870 IPR032675 -
Pral4625g00008 887 Gene3D - 134 306 IPR027417 -
Pral4625g00008 887 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 39 857 - -
Pral4625g00008 887 Gene3D - 307 392 IPR042197 -
Pral4625g00008 887 Coils Coil 78 98 - -
Pral4625g00008 887 PRINTS Disease resistance protein signature 770 786 - -
Pral4625g00008 887 PRINTS Disease resistance protein signature 249 263 - -
Pral4625g00008 887 PRINTS Disease resistance protein signature 174 189 - -
Pral4625g00008 887 PRINTS Disease resistance protein signature 341 355 - -
Pral4625g00008 887 FunFam Probable disease resistance protein At1g61300 136 301 - -
Pral4625g00008 887 FunFam Probable disease resistance protein At5g66910 306 392 - -
Pral4625g00008 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4625g00008 Pral-Chr4625 232751 235414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4625g00008 152 484 WRKY Transcription Factor Family AT5G45050 24.107 2.46e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4625g00008 - K13459 pcin:129286803 960.674