Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4625g00006 ATGGATATCACTTGCGACCCATTGAGTAGTTTGGTTGACAAGTTCTGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTGAGGAACTCACCAATGAAAGAAGCTCCAAACAACGGCAAATAGATAATGCTAGAAAAAATTTAGAACAAATTGAAGAGAAAGTTCAGCATTGGTTGCGCAAAGTAGATGAGCTTTTAACCCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGCAATGGCACAACAAGTTGTTGAAATCTATGGGAAGAGAAACTTTGATAGGGTTTCATATCCTGTTTCTCCCCCATCGATGCCAGAATTACTCAACAGAAAAAGCAATGAAGGGATTGGTTCTAGAACGCGAATTGTGAATCAAATTATGGAGCTCTTACATAATCCCAGTGTTAATACTGTCGGATTGTGTGGGCTTGGCGGTGTTGGCAAGACCACTATAGCTAAAGAGGTGGCAGAGAAGGCGAAGAATCAAAACATGTTTAAAAAGGTGATCATGGCAACTGTTTCTAATGAATTGGACGTTGAGAAGATTCAAGGCCAGATTGCAGAGAAGCTGGGTTTTCAACTGAATGAAAAATTTGAAGTAAGAGCTTATCGTCTATGTGAAAGGTTGAAGCAAGAGGAGAATATGCTCCTAATATTGGATGATCTTTGGAAGGAACTTGATTTAGGCGAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTCTAGCAAAAAGAATGAATGCTGCAAAATTTTACTAACTTCAAGGACTAAGAGTTTGCTGTCAAATGGCATGAAATGTCAAGAAATTATCAAAGTGGATTTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTATTGATTCAAGCACTCCTGACAACTTGATACCTATAGCCTGTGAGATTGTTCGAAAGTGTGGAGGCCTGCCACTAGCGATTGCTACAGCTGCCAAGGCATTAAAGAAAAAAAGCCTATGTGAGTGGCATGATTACTATGCACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGAGATATTGAAGTTAAGCTACAATCCTCTAAGCCAAGAGAACAAAAATATCTTCTTGCTCTCTGCCATGTTGTCCCATGATCCCTCAATTGAAGACCTGCTCATGTACTCGGTGGGGTTAGATATTCTTGAAGGAATAGAAAACATAAAAGATGCCCACATTGGAGTCTCTGCTGCCGTAACTAAGCTAAAATCGTTAAACTTATTTCTTGATAGCTTTTCTAGTCATCGCATTACAATACATGACGTCTTTCGAGATGTTGCATTAGCGATTGCACCCAATGAATTAAATGCATTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACAAAAATAAGCTTGAAGACTACAAGGGAATCTGCTTACAAAAGGGTGATATCAGTGACCTTCCAGAAGAGCTTCATGGTCCAAGATTAAAATTCTTTCTGCTAGACAGCACAAAACGCGATTTGGCCATACCTAGGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTGCATATTTCGTCACTACCATCACTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTGCTAGAAGACATAATTGAGGTTGGAAGCTTGAAGAAGTTAGAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAATTAACTTCTTTACAAATGTTGGATTTAGCCCATTGCTCCGAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGCAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAACGCGAGTCTTGACGAATATGAATTTGATGAGATACAGAATAGTTATCGGAGAGCACTGGATAGGGTGGAACGTCAATTATGA 2112 0.393 MDITCDPLSSLVDKFWDLVIDLTWEQLRYLFQYHRNIEELNERLEELTNERSSKQRQIDNARKNLEQIEEKVQHWLRKVDELLTQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAKAMAQQVVEIYGKRNFDRVSYPVSPPSMPELLNRKSNEGIGSRTRIVNQIMELLHNPSVNTVGLCGLGGVGKTTIAKEVAEKAKNQNMFKKVIMATVSNELDVEKIQGQIAEKLGFQLNEKFEVRAYRLCERLKQEENMLLILDDLWKELDLGEVGIPFVDVGSSSKKNECCKILLTSRTKSLLSNGMKCQEIIKVDFLSEDEALELFKRISELPIDSSTPDNLIPIACEIVRKCGGLPLAIATAAKALKKKSLCEWHDYYARLNHPLRRNITGIKEVDEILKLSYNPLSQENKNIFLLSAMLSHDPSIEDLLMYSVGLDILEGIENIKDAHIGVSAAVTKLKSLNLFLDSFSSHRITIHDVFRDVALAIAPNELNAFIVRHRSLKEWPDKNKLEDYKGICLQKGDISDLPEELHGPRLKFFLLDSTKRDLAIPRMFFKSSKELKVLAFTNVHISSLPSLMFLQKLKTLCLHSCLLEDIIEVGSLKKLEVLSLAYSEIQQLPIELAELTSLQMLDLAHCSELKVIPPKLLSSFKKLGVLLMANSFHQWKVEGSTEANENASLDEYEFDEIQNSYRRALDRVERQL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4625g00006 703 Gene3D - 317 408 IPR042197 -
Pral4625g00006 703 Gene3D - 146 316 IPR027417 -
Pral4625g00006 703 PRINTS Disease resistance protein signature 353 367 - -
Pral4625g00006 703 PRINTS Disease resistance protein signature 624 640 - -
Pral4625g00006 703 PRINTS Disease resistance protein signature 179 194 - -
Pral4625g00006 703 PRINTS Disease resistance protein signature 251 265 - -
Pral4625g00006 703 Coils Coil 30 85 - -
Pral4625g00006 703 Gene3D Ribonuclease Inhibitor 484 688 IPR032675 -
Pral4625g00006 703 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 682 - -
Pral4625g00006 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
Pral4625g00006 703 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Pral4625g00006 703 SUPERFAMILY L domain-like 458 662 - -
Pral4625g00006 703 SMART AAA_5 176 317 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4625g00006 Pral-Chr4625 138000 140188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4625g00006 177 644 WRKY Transcription Factor Family AT5G45050 23.670 2.30e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4625g00006 - - pcin:129285257 756.133