Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4625g00003 ATGGATATCACTTGCGGAACATTGAGTAGTTTGGTTGACAAGTTTCGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTAAGCAGCTCAATGAACGACTTGTGGAACTCATCGATGAAAGAAGCTCCATACAACATCAAATAGATGAGGCTACAAACAATTTAGAACAAATTGAAGACAAGGTTCATCATTGGTTGGGCAAAGTAGATGAGATTTCAGAGCAAATTCAAAAGTTTCATGAAGAAGAGAGTCAAGAAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGAAATGGCACAAGAAGTTATTGAAATCTGTCGAAAGAGAAACTTTGATAGAGTTTCATATCCTGTTCCTCCCGTATCGATGCCAGAATTACCCACCAGTGAAAGCAATGAAGGGATTGGTTCAAGAACGCAAATTGTGAATCAGATTATGGAGCACTTACATAATCCTAGTGTTAGTATTGCTGGATTGTGTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAAGGCGAAGAATCAAAACATGTTTGAAAAGGTGATCATGGCAACTGTTTCTAATGAATTGAACGTTGAGAAGATTCAAGGCCAGATTGCAGAGAACCTGGGTTTCCAACTCAATGAAAAATCTGAAGGAGTAAGAGCTCGTCGCTTGTGTGAGAGGTTGAAGCTAGAAAAGAATATGCTCCTAATATTGGATGATCTTTGGGAGGAACTTGATCTGGGCAAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTATAGCAAAAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAATAAGATGCTGTTGTTAAACCACATGAAATGTCAAGAAATTATCGAAGTGGATGTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTCTTGACTCAAGCACTCCTGACAACTTGATATCTATGGCCAATCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGATGAGTGGCAAGATTTCTGTAAACGATTGAATCATCCTTTGAGGAGAAACATCACAGGAATTAAAGAGGTGGATGCGATATTGAAGTCGAGTTATGATTGTCTAAGCTCGGAGAAAAAACGTATCTTCTTGCTCTCCGCCATGCTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTTCTCTATGGGTTTAGATATTCTTGACGGCATAGAAAACATAGAAGATGCCCGCATTGGAGTCTCTGCAGCCGTAAGTAATCTAAAAGCATTAAACTTATTTCTTGATAGCTTTTCCAGTCATTACTTTACAATACATGATGTCTTTCGAGATGTTGTATTATCGATCACACCCAATGAATTAAATGCATTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACAAAGATAAGCTTGAAGACTACAAGGGAATTTGCTTACAAGAGAGTGACATCAATGACCTTCCAGAAGAGCTGCATGGTCCAAGATTAGAATTCTTTCTGCTAGACAGCACAGAACGTGATTTGGCCATACCTAGGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTGCATATTTCGTCACTACCATCACTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTTCTAGAAGACATAATTGAGGTTAGAAGCTTGAAGAAGTTAGAAGTGCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCCGTCGAATTGGCAGAGTTGACTTCTTTACAAATGTTGAATTTAGCCCACTGCTTCAAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAACAAATTGGGGGTTTTGCTTATGGAAAATAGCTTTGACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGAAGGGCTTGCCAATCTCACTGGGAATGGCGGATGGTCAGCTATAA 2097 0.3972 MDITCGTLSSLVDKFRDLVIDLTWEQLRYLFQYHRNIKQLNERLVELIDERSSIQHQIDEATNNLEQIEDKVHHWLGKVDEISEQIQKFHEEESQEKTECSVTSCPNLWLRYKLSKRAKEMAQEVIEICRKRNFDRVSYPVPPVSMPELPTSESNEGIGSRTQIVNQIMEHLHNPSVSIAGLCGLGGVGKTTIAKEVAKKAKNQNMFEKVIMATVSNELNVEKIQGQIAENLGFQLNEKSEGVRARRLCERLKLEKNMLLILDDLWEELDLGKVGIPFVDVGSYSKKNEGCKILLTSRNKMLLLNHMKCQEIIEVDVLSEDEALELFKRISELPLDSSTPDNLISMANQIVRKCHGLTLAIATAAKALRGKNLDEWQDFCKRLNHPLRRNITGIKEVDAILKSSYDCLSSEKKRIFLLSAMLSHDPSIDDLLMFSMGLDILDGIENIEDARIGVSAAVSNLKALNLFLDSFSSHYFTIHDVFRDVVLSITPNELNAFIVRHRSLKEWPDKDKLEDYKGICLQESDINDLPEELHGPRLEFFLLDSTERDLAIPRMFFKSSKELKVLAFTNVHISSLPSLMFLQKLKTLCLHSCFLEDIIEVRSLKKLEVLSLAYSEIQQLPVELAELTSLQMLNLAHCFKLKVIPPKLLSSFNKLGVLLMENSFDQWKVEGSTEANENASLDELKGLPISLGMADGQL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4625g00003 698 Gene3D - 318 409 IPR042197 -
Pral4625g00003 698 Coils Coil 30 78 - -
Pral4625g00003 698 Gene3D Ribonuclease Inhibitor 478 690 IPR032675 -
Pral4625g00003 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 417 IPR027417 -
Pral4625g00003 698 FunFam Probable disease resistance protein At1g61300 144 311 - -
Pral4625g00003 698 Gene3D - 145 317 IPR027417 -
Pral4625g00003 698 PRINTS Disease resistance protein signature 625 641 - -
Pral4625g00003 698 PRINTS Disease resistance protein signature 179 194 - -
Pral4625g00003 698 PRINTS Disease resistance protein signature 252 266 - -
Pral4625g00003 698 PRINTS Disease resistance protein signature 354 368 - -
Pral4625g00003 698 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 688 - -
Pral4625g00003 698 SUPERFAMILY L domain-like 457 663 - -
Pral4625g00003 698 Pfam NB-ARC domain 162 406 IPR002182 GO:0043531
Pral4625g00003 698 SMART AAA_5 176 318 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4625g00003 Pral-Chr4625 65102 67293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4625g00003 177 661 WRKY Transcription Factor Family AT5G45050 23.455 1.88e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4625g00003 - - pcin:129285257 771.155