Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4625g00002 ATGGATATTACTTGCGGAACATTGAGCAGTTTTGTTGACAAGTTCTGGGACCTAGTGCTGGACCCAACTTGCGAGCAGTTTCATCATCTGTTTCACTATCACAGAAACATTAAGCAGCTCAATGAACGACTTGTGGAACTCGTCGATGAAAGAAGCTCCGTACAACATCAAATAGATGAGGCTACAAACAATGCAGAACAAATTGAAGACAAGGTTCTTCATTGGTTGCGCAAAGTAGATGAGATTTCAGAGCAAATTCAAAAGTTTCATGAAGAAGAGAGTCAAACAATAACAGAGTGTAGCGTAACTTCATGTCCCAACCCGTGGCTGCGCTATAAATTAAGCAAAAGAGCAAAGGCAATGTCACAAGAAGTTGTTGAAATTTGTAGAAAGGGAAATTTCAATACAGTTTCATATCGCGTTCTTCCACGGTCCATGCCAGAATTAGTCAACAGAGAAAGCGATGAAGGAATTGGTTCAAGAGTGCAGCTTGTGAATCGAATTATGGAGGAATTACGGAATCCAAGTGTTAATATGATCGGATTGTGTGGGCCTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAGCCAAAAGATGTTTTCAAAGGTGATCATGGTGACTGTTTCTGATGAGTTGTACGTTGAGAAGATTCAAGGCCAGATTGCTGAGAAGCTGGGTATGCAACTCAATGAAAAAACTGAAGAAGTAAGAGCTTGTCGTCTCTGTGAGAGGTTAAAGCTAGAGAAGAATATGCTCCTCATATTGGACGATCTTTGGGAGGAACTTGATTTGGGAAGCGTTGGAATTCCCTTTGTTGATGTTGAAAATTATAGCAAAAAGGACGGAGGTTGCAAAATTTTACTAACTTCAAGGAATGAAACGCTACTGTCACACCGCATGAAATGTCAAAAACTTATCAAAATAGGTGTTTTGTTAAAGAATGAAGCATTGGAGTTGTTCAAGAGGATTGCTGAACTTTCTGCTGATTCAAGCAATCTTGAGCTGATATCTATAGCCTCTGAGATTGTTCAAAAGTGTGGACGCTTGCCGCTAGCGATTGCTACAGCTGCTAAGGCATTGAGGGGAAAAAATTTGGATGAGTGGAAAGATTACCTTGCACGATGGAAAAATCATTTAAGGAGAAACAACACAGGAATTAAAGAGGTGGATTCTTCTTTGAAGTTGAGCTACGATCCTCTAAGCTTGGAGAATAAAACTATTTTCTTGCTCTCTGCCATGTTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTCTGGGATTAGATATTCTTGAAGGCATAGAAAATATAGAAGAAGCCCACGTTGGAATATGTGCTATTGTAAGTAAGCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTGGTCGTCGTGTTACGATACATGACGTCTTTCGAGATGTTGCATTATCAATTGCTTCCAATGAATTAAATGTTTTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACAAAAATAAGCTAGAAGGCTACAAGGGAATTTGCTTACAAGATAGTGACATCAGTGAGCTTCCAGAAGAGCTGCATGGTCCAAGATTAGAATTTTTTCTACTAGACAGCACAAAGCGTGATTTGATCATATCCAACATGTTGTTCAAATCTTCAAGGGAGATGAAAGTGTTGGCTTTTACCAATGTGCATTTTTCATCACTACCATCACTTAGTTTCTTACAAAAACTAAAAACATTGTGTTTACACTCTTGCTTACTGGAAGATATAGCTGAGGTTAGAAGCTTGAAGAATTTAAAAGTCCTGAGTCTTGCCTACTCTGAAATTCAACGACTACCAGCTGAATTGGCACAACTGACTTCTTTACAGATGCTGAATTTGGCCCACTGCTCTGAACTCAAAGTGATTCCCCCAAAGCTCCTATCTAGCTTGAAAAAATTGGAAGTTTTGTACATGGGAAATAGCTTTAATCGATGGAAAGTTGAAGGATCTAGTGAAGCTATTGAAAATGCAAGTCTTGAAGAGTTAAAGGATTTGCCGATCTCTTCACTAGATGTTCATATTCCTAACGTCTCTATGTTGCCGGAGAACTTGTTCTTAGATATGCATTTGAAGAGATACAGAATACTTATTGGACAGCATTGGGAATGGCAAGGCAATTATGAAAGTTCAAAGATATTGAAAATTGAGCTTGAGAGTAGCATCCATTTGAACACTGGGGTTCGAAAGTTAATGAGGGGAGCTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCGTGGTCATGATGGAAGAGCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTAATGATACTATTAGATACATTGTTTTGAACTCGGCACATCATGAAGCTGCAAAAAATAACGTATCTAATAAAATGTCGAAGTTACTTCTCAACCAGGTGTTATTCCCAAAATTAGAGGGGTTGGAATTGTCCAATTCAATCAGTTTGATTCCATTGATATGGGATGACCAACTTTCACACACCTCATTTAGCAATTTGAAAACATTGATTGTGGAAAATTGTGGCTTTGTGAAATTGGTGCCTCTTCATGTGCTAAAGTCTTTAAACAATTTGGAAGCATTAGAAGTCAGGGATTGTCACGTGTTGGAGATGGTGTTTGATTTTGAAGATTCGAATGAATATAAAGAGAAGACGTCATCATCACTTAAGGTTGTGCCGTTGAAGAAGTTAACGCTAGATGGATTGCCAAAATTGAAGAATGTGTGGAGCAATCACTACCAGGGAAATGTCTCCTTCCCAAGTCTAACGAATGTATCTGCTTACGATTGTGAAAGCCTCACAAGTATGTTTCCTGCATCTATAGTCAAAGGCATGCTTCGTAATCTTGAACGGCTTCATATATCTCATTGTGGTATAGATGTAATTGTTGCAAAAGATCAAGTTTCAGAATCTATTGCTTCTACACTTGAGTTTCCCACGCTGACTTCCCTTGACCTTTCTTTCCTTCAAAATTTGAAGAACTTCTATCCACAGAAACACACATTAGAATGGCCACAACTTCAGCGATTATCTATTAGATATTGTGATGAAATAGAGATATTTGAAAAGGAAGTCTCAAGTTCACTAGAAATTCATGAGGAAAAGCGCACATTAGACTCAAAATATCCTCTACTGTCCCATGACAAGGATATTCGTAATTTGGAGGAGTTGAGATTGGAGGGTAAAGGGGCTGAGATGATAGGGAGTGGCCAGTTTCCAGCGTACCCCTTCCCCAAAGTAAAACTGCTTCATCTATCAGTAGAGAAAGCCACAACTATATCGTACAAATCATTGTTGAAGAGCTTTCCAAAATTAGAGGAGTTAGAGTTGGGTGGTGACATTAAGGAGGCTGTTGGAGGGGATGAAGTTCCCTTTCCAATAAAATTGACTCTTCAGAATCTTTACAAGATGCCATCTTTGGTTTCTTTACCAAATCTCACACATCTTACAGTGAGATTTTCTTATGGGCGGACCACTTTGATGACGTCATCAACTGTTCGAAGCTTGGTCCATCTCACACGTCTCTCAATTGGTCACTGCGATCGAATAGGGGAAATCATATCGAAGCAGGAAGGAGAGGATGATGAGGATAAGGAAATCTTTTTCAACAAATTGCAGTACTTGCAACTTTGTGACCTACCAAGACTGAAGAGATTTTGCGGCCACGATTATACTTTCAGGTTTCCATTATTGGATACTCTAATCATAAGTGGATGTCGAAAATTGGAAATATTCTCTCCAGGACTCATTGATGCACCATCTCTTCAAAGCATTCAGTTGTCAGACGATGAGGGAAAACGTCATGAAATTTGGGACACCAACCTTAACAAAACAATCCACCAACAGCGATTTGTCGGTACAAGAAAGCTGGTGTTAGATGAGGATGATGTCAGCATGATAAGGAATGACCAATTTCCAGCGGACCATTTTTCCCACGTGGAAATTCTTGGCATAGAAAGATTTGTTGGTGAAGGGGTAACATTTCCATACACATTGCTTGGAAGATTTCCGAAACTGAGTGAACTTGGTGTGAAGGATAGTTTATTTGAGGAGATATTCCCATCACATAATGCACACATTATTGTTGATCAAATTCCACCGTTCAGGGAACTCTGCCTTGCCAATTTGACGGTGCTCAAGGTGTCCCGATGTAATCGGCTCGTCTATTTAATGAGAAACTCAACCGCCAAAAGCTTGGTGAATCTTGAAACATTGGAGATAAGTAACTGCCGTGAGATGGAAGAAATTGTAACGAAGCAGGATGGAGAAGATGACAAGGACAAGGAAATCTATTTTAGCAAACTGAAGCTTTTGGAACTTCACTATTTACCAAGATTGAAGAGATTTAGTGGCCGCAGTTGTACTTTCAGGTTTCCATTATTAAAATGTGTAACTGTAGCAGATTGTCCTCGGCTCATAATGTTCAGTCCAGGAGCCATTCATGCCCCGCAGCTTCAAAGCATTCGAGTACAAAGATATGACCGCCATAAACATATTTGGATGACCGATCTTAACAATACCATCCAACATCAGTTTATGACTCAAGAGGTAGCTTCCACAACCCAATGCATGGTGTTAAATGCGGAAAATATCACAATGATAAAGGATGTCTTTCCTAAAGTAAGAGTTCTTGATGTAGAAAGCTTCCAAGATGAATGGATGACCTTTCCCTATAGCTCCCTTGAAAGATTTCCTAAGTTGAATTGGCTTTGTGTGCGGCATAGTTCCTTTGAGGAGATATTCCCTTCACAGGACCAGATTATTAATTTTATGGGAAAAATCCTTCCATTTAAGAGATTAGACATTTCTAATTTGGATAAACTCAAGAGTATATGGAAGGATGATTCTCAACTACCACCAATTCATCAAAGTCTGAAATCCCTCAGTGTCAATAGTTGCTGTAACTTGGTCAAGTTAACACCATCATCTGCTTCATTTGAAAAGTTGAGAAGCTTATCCGTATCAGGATGTCATCAACTCATCCATTTAGTGACAAGTTCAACTGCCAAAAGCTTGGTGGGACTTGAATGGTTGAAGATAAATGATTGCAAAAAGATGGAGGAAATTGTAAAGAATGAGACCAACGAAGATGTAGAAGGTGGAATCACATTCAACCAGTTGCATAGGATCAGACTTATTGATATGCTAAGCTTGAAGATGTTTTCTTCACAAAGTTGCACCTTCGAATTCCCAAAATTAGAAGACATACTAATAACTGGATGCCCTCAAATGAAGAAGTTTGGTCTAGGAGCGTTGAAAACACCAAAGTTATCTAAAGTGAAAATAGAAGGATGTGATGTGGAATGGGCAAATGAAGGGGACCTTAACAAAACAATAGAAATGCTATCCTCAGCAAAGGTATGA 5418 0.3909 MDITCGTLSSFVDKFWDLVLDPTCEQFHHLFHYHRNIKQLNERLVELVDERSSVQHQIDEATNNAEQIEDKVLHWLRKVDEISEQIQKFHEEESQTITECSVTSCPNPWLRYKLSKRAKAMSQEVVEICRKGNFNTVSYRVLPRSMPELVNRESDEGIGSRVQLVNRIMEELRNPSVNMIGLCGPGGVGKTTIAKEVAKSQKMFSKVIMVTVSDELYVEKIQGQIAEKLGMQLNEKTEEVRACRLCERLKLEKNMLLILDDLWEELDLGSVGIPFVDVENYSKKDGGCKILLTSRNETLLSHRMKCQKLIKIGVLLKNEALELFKRIAELSADSSNLELISIASEIVQKCGRLPLAIATAAKALRGKNLDEWKDYLARWKNHLRRNNTGIKEVDSSLKLSYDPLSLENKTIFLLSAMLSHDPSIDDLLMYSLGLDILEGIENIEEAHVGICAIVSKLKSLNLFLDSFSGRRVTIHDVFRDVALSIASNELNVFIVRHRSLKEWPDKNKLEGYKGICLQDSDISELPEELHGPRLEFFLLDSTKRDLIISNMLFKSSREMKVLAFTNVHFSSLPSLSFLQKLKTLCLHSCLLEDIAEVRSLKNLKVLSLAYSEIQRLPAELAQLTSLQMLNLAHCSELKVIPPKLLSSLKKLEVLYMGNSFNRWKVEGSSEAIENASLEELKDLPISSLDVHIPNVSMLPENLFLDMHLKRYRILIGQHWEWQGNYESSKILKIELESSIHLNTGVRKLMRGAEDLYLYGSNGLENVLRGHDGRAFPHLRHLQIESNDTIRYIVLNSAHHEAAKNNVSNKMSKLLLNQVLFPKLEGLELSNSISLIPLIWDDQLSHTSFSNLKTLIVENCGFVKLVPLHVLKSLNNLEALEVRDCHVLEMVFDFEDSNEYKEKTSSSLKVVPLKKLTLDGLPKLKNVWSNHYQGNVSFPSLTNVSAYDCESLTSMFPASIVKGMLRNLERLHISHCGIDVIVAKDQVSESIASTLEFPTLTSLDLSFLQNLKNFYPQKHTLEWPQLQRLSIRYCDEIEIFEKEVSSSLEIHEEKRTLDSKYPLLSHDKDIRNLEELRLEGKGAEMIGSGQFPAYPFPKVKLLHLSVEKATTISYKSLLKSFPKLEELELGGDIKEAVGGDEVPFPIKLTLQNLYKMPSLVSLPNLTHLTVRFSYGRTTLMTSSTVRSLVHLTRLSIGHCDRIGEIISKQEGEDDEDKEIFFNKLQYLQLCDLPRLKRFCGHDYTFRFPLLDTLIISGCRKLEIFSPGLIDAPSLQSIQLSDDEGKRHEIWDTNLNKTIHQQRFVGTRKLVLDEDDVSMIRNDQFPADHFSHVEILGIERFVGEGVTFPYTLLGRFPKLSELGVKDSLFEEIFPSHNAHIIVDQIPPFRELCLANLTVLKVSRCNRLVYLMRNSTAKSLVNLETLEISNCREMEEIVTKQDGEDDKDKEIYFSKLKLLELHYLPRLKRFSGRSCTFRFPLLKCVTVADCPRLIMFSPGAIHAPQLQSIRVQRYDRHKHIWMTDLNNTIQHQFMTQEVASTTQCMVLNAENITMIKDVFPKVRVLDVESFQDEWMTFPYSSLERFPKLNWLCVRHSSFEEIFPSQDQIINFMGKILPFKRLDISNLDKLKSIWKDDSQLPPIHQSLKSLSVNSCCNLVKLTPSSASFEKLRSLSVSGCHQLIHLVTSSTAKSLVGLEWLKINDCKKMEEIVKNETNEDVEGGITFNQLHRIRLIDMLSLKMFSSQSCTFEFPKLEDILITGCPQMKKFGLGALKTPKLSKVKIEGCDVEWANEGDLNKTIEMLSSAKV 1805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4625g00002 1805 PRINTS Disease resistance protein signature 621 637 - -
Pral4625g00002 1805 PRINTS Disease resistance protein signature 249 263 - -
Pral4625g00002 1805 PRINTS Disease resistance protein signature 179 194 - -
Pral4625g00002 1805 PRINTS Disease resistance protein signature 350 364 - -
Pral4625g00002 1805 Coils Coil 30 78 - -
Pral4625g00002 1805 Gene3D Ribonuclease Inhibitor 513 1051 IPR032675 -
Pral4625g00002 1805 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1292 1503 - -
Pral4625g00002 1805 SUPERFAMILY RNI-like 1155 1522 - -
Pral4625g00002 1805 Pfam NB-ARC domain 163 402 IPR002182 GO:0043531
Pral4625g00002 1805 Gene3D Ribonuclease Inhibitor 1068 1284 IPR032675 -
Pral4625g00002 1805 Gene3D Ribonuclease Inhibitor 1523 1784 IPR032675 -
Pral4625g00002 1805 SMART AAA_5 176 314 IPR003593 GO:0016887
Pral4625g00002 1805 SUPERFAMILY L domain-like 474 1046 - -
Pral4625g00002 1805 Gene3D Ribonuclease Inhibitor 1285 1510 IPR032675 -
Pral4625g00002 1805 Pfam Leucine rich repeat 580 634 IPR001611 GO:0005515
Pral4625g00002 1805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 413 IPR027417 -
Pral4625g00002 1805 Gene3D - 133 313 IPR027417 -
Pral4625g00002 1805 SUPERFAMILY L domain-like 1539 1784 - -
Pral4625g00002 1805 Gene3D - 315 405 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4625g00002 Pral-Chr4625 31884 43200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4625g00002 177 641 WRKY Transcription Factor Family AT5G45050 25.188 9.42e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4625g00002 - - pcin:129285257 966.452