Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4624g00001 ATGGGCGTCGACTACTACAAGATTCTTCAGGTAGACCGAAATGCCAAAGATGATGATCTCAAGAAAGCCTATCGGAAGCTTGCCATGAAGTGGCACCCTGATAAGAACCCTAACAGCAAGAAAGAGGCTGAAGCTAAATTCAAGCAAATCTCCGAGGCTTACGATGTTCTGAGTGATCCACAAAAGCGAGCAGTATATGACCAATACGGTGAGGAGGGATTGAAGGGACAGGTGCCACCCCCGGGTTCCGGATTTTCAGGTGGTCCTGATGGCGGTCCAACTATGTTTCGGTTCAACCCCAGGAGCGCAGACGATATATTTTCAGAGTTCTTTGGGTTTTCCAGTCCCTTTGGTGGAATGGGTGATATGGGTGGTCGAGCTGGTGCTTCTGGGTTTCCTCGTGGTATGTTCGGCGATGATATATTCACTTCATTTAGGAGTGGTGCTGGAGAGGGCTCTGGAAATATGCCAAGGAAAGGTGCACCCATCGAACGAAACCTGCCATGCAGTCTGGAGGATCTGTATAAAGGAACGACGAAGAAGATGAAGATTTCGAGGGATGTTACCGATCCCAGTGGGTGA 582 0.4914 MGVDYYKILQVDRNAKDDDLKKAYRKLAMKWHPDKNPNSKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGSGFSGGPDGGPTMFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRAGASGFPRGMFGDDIFTSFRSGAGEGSGNMPRKGAPIERNLPCSLEDLYKGTTKKMKISRDVTDPSG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4624g00001 193 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 193 - -
Pral4624g00001 193 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pral4624g00001 193 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pral4624g00001 193 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pral4624g00001 193 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pral4624g00001 193 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pral4624g00001 193 Gene3D DnaJ domain 3 121 IPR036869 -
Pral4624g00001 193 MobiDBLite consensus disorder prediction 71 91 - -
Pral4624g00001 193 CDD DnaJ 4 59 IPR001623 -
Pral4624g00001 193 Pfam DnaJ domain 4 67 IPR001623 -
Pral4624g00001 193 Gene3D - 153 192 - -
Pral4624g00001 193 FunFam DnaJ subfamily B member 13 3 121 - -
Pral4624g00001 193 SUPERFAMILY Chaperone J-domain 3 120 IPR036869 -
Pral4624g00001 193 MobiDBLite consensus disorder prediction 148 167 - -
Pral4624g00001 193 SMART dnaj_3 3 62 IPR001623 -
Pral4624g00001 193 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4624g00001 Pral-Chr4624 1845 2902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4624g00001 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 2.76e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4624g00001 K09510 - qsa:O6P43_016598 312.768