Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00013 ATGGAGCCTGAGACAGAGCATTCTTGGTCGTCCTGTGAAGGCATAAGCTCAACTTTTGATCCTGTTGAGTCTTTTGACTTCAACGTGGACGCTCTTTTGTTCCCCACTTCAGAGGATGCTTCTTCTGCAGTCTTCTGCACTGATCATGTCTATTTCCCTATTGATGAACTCCCATCATTGATTGATGATTTCTCCATGGATCTTGATGCTTTTGATGCCACTTTGAGTTCTCAAAGTCCGGGTATTATTCATGGATGCCCTGAAGAAGGTGAGGGAATAAGCTTTGCTTCCCAGAACCCGTGTTTTCAGAGAGATGTTTGGAGTCCAACCACATCGATGCAATCAGGCATGTCTAAAGTAGTACAAGCACCACCATCACTGATCATACCAGGAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTCTGGAAGCCATTGGAGAAGCCTTAGAGCAAGGACAGAAGATTCTGAGACGCATCAGCCACAAAGTAAGCCCTCTTGGTGATCCTCTTGAACGTCTGGCATTCATTTTGTCCCAAAATCATGATGATACAGAACAAGGGAGTTTCATCAAACAGGAGGCCTGCAAGAGCTTCCACCACTTTTTCAAGGCTATCTACCAAGGCCTCCCACATGGAAGAATTGCTCATTTTGCAGCCAATTCAGTAATTCTAGGATCCATACCAGCTGATTCAGAAGTGATACATATAATAGACTCTGATATGGGAGAAGGGGGTCAATGGCCTCCATTGATGGAGGCTATTGCTCAACAGCACAAAACTTTGAAACTGACTGCTATCACATTGGAAGAAGAGGAGAGTCCAGATATTGGTTGTGTTTCCACTCAATGGAAATTTGAAGAAATCAGAAGGAAGCTCTATGAGCACGCCAAATCATGTGGTTTGAAGTTGAAGGTGGAGGAACAGAGGATCGAGGAATTGGTGACAGAGCTTAAGAAATTGAACAAAAGGAGTGGGCATGGAAATGGAAAGAGAAATTTCGTGGCCTTCAATTGCATGGCGGGTCTCCCACATATGGGAAGGGTCAGAAGTAGGAGACATGTCTTGGAATTTCTACAAGTAGCAAAGGATTTCATCAAAAGCTCAACTCCCAACAGGGGAATTATAGCTTTTGGTGATGGAGAAGCCTGTGAGAAACTGAGAAACAGCACCGATTTCATGTCCTTCTTTAATGGCCATTTGGAGCATTACCATGCTTTATTAGAATCCATAGAATCAAATTTCCCATTCCAATTCTCAGAGGCAAGAACAGCTATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAGGATTGGCTTCGGAGGTGGGAGGAGATGAGACAATGTGGGAATGTTCAATCAGGAATAGAGTTAGAGCGTGGAAACTTGAGGGAGGAGACATTAATGGAAGCTGGAGAAATGTTGAGGGGAATGGAAGGGTCGTACGAGGTTAAGATTGAAGGCAATAATGGCAATGAAATGGTTCTGCACTGGAAAGGAACGCAGCTTCTTAGAATTTCAACGTGGGCAAATTAA 1548 0.4393 MEPETEHSWSSCEGISSTFDPVESFDFNVDALLFPTSEDASSAVFCTDHVYFPIDELPSLIDDFSMDLDAFDATLSSQSPGIIHGCPEEGEGISFASQNPCFQRDVWSPTTSMQSGMSKVVQAPPSLIIPGEDMEMENQLSLPHLLEAIGEALEQGQKILRRISHKVSPLGDPLERLAFILSQNHDDTEQGSFIKQEACKSFHHFFKAIYQGLPHGRIAHFAANSVILGSIPADSEVIHIIDSDMGEGGQWPPLMEAIAQQHKTLKLTAITLEEEESPDIGCVSTQWKFEEIRRKLYEHAKSCGLKLKVEEQRIEELVTELKKLNKRSGHGNGKRNFVAFNCMAGLPHMGRVRSRRHVLEFLQVAKDFIKSSTPNRGIIAFGDGEACEKLRNSTDFMSFFNGHLEHYHALLESIESNFPFQFSEARTAMENLFVAPYISCEDWLRRWEEMRQCGNVQSGIELERGNLREETLMEAGEMLRGMEGSYEVKIEGNNGNEMVLHWKGTQLLRISTWAN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00013 515 Coils Coil 307 327 - -
Pral4623g00013 515 Pfam GRAS domain family 152 513 IPR005202 -
Pral4623g00013 515 ProSiteProfiles GRAS family profile. 129 514 IPR005202 -
Pral4623g00013 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 131 507 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00013 Pral-Chr4623 266477 268024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00013 206 513 GRAS Transcription Factor Family AT3G60630 23.899 4.01e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4623g00013 GRAS 6.8e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00013 - - pcin:129291421 733.021