Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00012 ATGCAAGCAGCTTATTATCTCATGAAAAAAGTAAAAGTACGTGCCCTGTTGGGGCCGCAGAATTCAGAGCAAGCAAGGTACATTGTGAGACTTGGTGAGCTATTCCAAGTTCCCGTCATTTGGTTTCCCATAACTGGTCCATCTCTTTTGCCACCGCCATCTCCATCCTCCATCTACATCGATCAAGGCCTTGATTGCTATCAGTTCCAAGCCATAGCCGCCAGTCTTAAGGCTTTTGGGTGGCAATCAATCGTCCCCATTTATGAAGAGACTGAATATGGCAGTCATCTTGTTCCATGCCTCACCAATGTCTTGAAAGAGATGGGCATACGAATGGCTAACGTAACTGCCATTACTTCAGATTCATCAGATCTTGCAATTAACATTACTCTTAACAGGTTAAACAACATGCGAACACATGTATTTCTTGTCCATATGAGCATGGATCTCGGAACAACATTTGTTTTGTCTGCACAAAGGAAAGAGATGATGGGTGAAGGATATGCTTGGATACTTACGCAAGAGCTATCTTCTTTGACAGATCCTCAAGTTACAGTCAAGAGAAACTTGTATACTGGCCAAGTCCTATCTGGGAGTTTTACTGATTTCTTTGCTTTGAAAAGGTATATGCAAGGTGCATTGGGAGTGAGGCCAATGGATTCTAACAAAACAGATGTGCGTAAGGGGATAGAGAATAATTTCACTGCTAAGTTCGGAGGAGCTAGTCTAACTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCATTAGAGAAGCCAGGCGCAGACAATAATGGCACAAAACTTCGAAGTGAAATTCTGGCTACTAATTTCACAGGCGTGTCAGGGATAAATTTTAATTTAAAAGGAGGACAACTAGATCAATCAGTGCTTGAAGTATACAATGTGGTAGGAACAAGAGAAAGGATCATCGGATCTTGGAACCCCAAAGATGGATTTGTTCAAAATAATAGTAAAAGTGGCGAGGTATCTGGTGATGGATACCAACTAAGTGGTCCACTGGCACTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGAATAGGGGTCCCAAGAACAAATTCTTTTCCTGAATTTGTGAATGTAGATAATTCTAGTAAGCATCGGATTGATGGCTTTGCTATTCATGTGTTCTTAAAAGCTATCGGTCATTTGCCGTTTCTGTTAAATAATTATGAGTTTGTTCCCTTGCCCAAAAAAAGCGACACTCCCACAAACTATGATGATATTCTCTGCAGCCAAATGAAAGACGAGGATCTTGATGCTATAATTGGAGACATCACAATTGTAGCAAAACGCACAAACTGTGTTGATTTCACGTTGCCGTATCTAGATTCAAGCGTAGCAATGGTGCCATCATAA 1401 0.4154 MQAAYYLMKKVKVRALLGPQNSEQARYIVRLGELFQVPVIWFPITGPSLLPPPSPSSIYIDQGLDCYQFQAIAASLKAFGWQSIVPIYEETEYGSHLVPCLTNVLKEMGIRMANVTAITSDSSDLAINITLNRLNNMRTHVFLVHMSMDLGTTFVLSAQRKEMMGEGYAWILTQELSSLTDPQVTVKRNLYTGQVLSGSFTDFFALKRYMQGALGVRPMDSNKTDVRKGIENNFTAKFGGASLTIYGWWAYHTIEALAMALEKPGADNNGTKLRSEILATNFTGVSGINFNLKGGQLDQSVLEVYNVVGTRERIIGSWNPKDGFVQNNSKSGEVSGDGYQLSGPLALWPGDTLDKPPKLRIGVPRTNSFPEFVNVDNSSKHRIDGFAIHVFLKAIGHLPFLLNNYEFVPLPKKSDTPTNYDDILCSQMKDEDLDAIIGDITIVAKRTNCVDFTLPYLDSSVAMVPS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00012 466 Gene3D - 355 466 - -
Pral4623g00012 466 Gene3D - 67 256 - -
Pral4623g00012 466 Pfam Receptor family ligand binding region 2 308 IPR001828 -
Pral4623g00012 466 SUPERFAMILY Periplasmic binding protein-like I 2 349 IPR028082 -
Pral4623g00012 466 PANTHER OS06G0188250 PROTEIN 209 309 - -
Pral4623g00012 466 SUPERFAMILY Periplasmic binding protein-like II 351 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00012 Pral-Chr4623 239672 241269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00012 3 464 Ion Channels AT2G24720 30.677 5.23e-68 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00012 K05387 - qsa:O6P43_022275 310.457