Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00011 ATGGAGAAAAGGGGAAGAGAATCTCTCATATGTGTGGGCTTATTGTGCCTAATGGTAACCCTAACAGAGTCCAAGACTGTAACCATACCAGTAGGAGTGATTCTGGATTTGAACTCATCACTTGGTAACACCACTCTCAACTGCATCGACCTCGGACTCTTCGACTTCAACTCCACGCATGGTTCCTACGCGACCAGGCTCCAACTCCATTTCAGGCATTCTGGAAACGATCTCCTCACTGCAGCTAGTGCAGCTTGGAAGCTAATAAATAAAAGAAAGGTGCATGCAATCCTGGGACCTCAAAACTCAGAGCAAGCAAGGTATGTTGTAGAATTTGGTTACAAGACTGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTGTTGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATCGAAGCTTATGATTGGCAGTCTGTGATCCCCATTTATGAAGATCCAGAATTCGGCAACGACCTCATTCCATGCCTCTCTTATGCCCTGCAAGACACGGACACTCGAATGCCTTACATAAGTGTCATCAATCAAACTTCCACGGATTCTCAAATCGCCGATGAGCTTAACAAGATAAAAGCCCAGCGAACATTTGTGTTTGTCGTTCATATGTCTCTGGAGCTTTGGTCAATATTTGTGGAACATGCCAAAAATGCGGACATGATGAGCGAAGGATACGCTTGGATACTTACGCAAGGCCTGTCTTCTGTGATGAATCCCGAAGCTTTAGATGTCAGAATGAAAGGCTATATGGATGGGGCTTTGGGTGTGAGGCCATTCGTGTTATCCAACTTAACTAAGCGCCTTTCCTTAGTTAGAAAATTAAAGTCTGAGTACAATAAAACTCTTTCTCTAAATGGCTTGTGGGCTTATGACACTATCACAGCATTGGCCAGAGCCGTAGAGAAGGCCGGCTTAGTCAGTTTTAATGAAAGTGGAGCTGATCTTCGCAACGAAACAGGCCCAGAACTTCGCGGAGCAATTCTGGATACTGATTTCGTTGGCTTGTCAGGGAATTTCAATTTGAGGCAAGAACAACCAGAACAATCACATGTTGTGGTATACAATGTGCAAGGCCAAAAAGAAAGGACAATTGGATATTGGAGCCCCGAAAAAGGACTTGTTCGAATGCAAAGTGTACGTGGTGAACCAATATGGCCGGGTAACACAAAGGAGATCCCACCCAAGTTGAAAGTTGGGGTCCCAAAGACGCATTTTACTGAATTTGTTGATGTTAATGGGAGTGTAGAAGGGCAGCATGTATCAGTTGCTGGCTTTGCTGTTGATGTATTTAAGCAAGTGGTTGGCCTCTTGCCATTACCTATACATTATGAGTTTGTGCCTTTGTACAACAGTGATGGAAAGCTGACTCCCTTCAGCTATGATGATCTTCTCTGCCAATTCGCAGACAAGAAAGTTGATGTTGATGTTATAATTGGAGACATCACAATTGTAGTGAATCGCACAGATTATGTTGATTTCACAATGCCATATTTAGATTCAAGTGTGTCCATGGTGGTAAAGTTGTATCAACTTGTTGCTCGTACTGATCTATGTGACACTTTGTTGTGTGTGGTGATTGCAGATGTTGGGTTTTTGAAAAGTGGCACATCTAGAGTGCTGGTGATAGTGGTCATGTTTATATTGACCATAGCGCTGCAAGTTTATACAGCAAATTTAACATCAATTTTGGCAGATAGGACAAAGCCAAAGCCTCCTCCATGGAAGGACGTGCAAGAGATTAGAAGGGGCAATCGGACAGTGGGATATCAAAAGGATTCCTGGATGAGAGGGTTTCTGATTGACCAATTAGGATTGAAGGATGATCAGTTAAGGGCTTTTACAAGCCGTAAAGAGTACAAGGATGTTTTATCAAATGAAGACAAAGAAAAGGGAGGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCAAGCTCTTCCTTTCCCAATGCCCTTCTTGCCAAATGGTAGGACCAATATACAAAGCGGGTGGATTTGCCTTTGTGAGCATTTCCAAAGAACTCTACCTTGGTCTCGAATTTTTCAACTGCAATATTGGAAGTGACTCAAAATGTGACGATGTTTCGTGA 2163 0.4327 MEKRGRESLICVGLLCLMVTLTESKTVTIPVGVILDLNSSLGNTTLNCIDLGLFDFNSTHGSYATRLQLHFRHSGNDLLTAASAAWKLINKRKVHAILGPQNSEQARYVVEFGYKTDVPVIWFSPSGPSLLPPRTRFFIHSNSTRSHCSQFEAIAAIIEAYDWQSVIPIYEDPEFGNDLIPCLSYALQDTDTRMPYISVINQTSTDSQIADELNKIKAQRTFVFVVHMSLELWSIFVEHAKNADMMSEGYAWILTQGLSSVMNPEALDVRMKGYMDGALGVRPFVLSNLTKRLSLVRKLKSEYNKTLSLNGLWAYDTITALARAVEKAGLVSFNESGADLRNETGPELRGAILDTDFVGLSGNFNLRQEQPEQSHVVVYNVQGQKERTIGYWSPEKGLVRMQSVRGEPIWPGNTKEIPPKLKVGVPKTHFTEFVDVNGSVEGQHVSVAGFAVDVFKQVVGLLPLPIHYEFVPLYNSDGKLTPFSYDDLLCQFADKKVDVDVIIGDITIVVNRTDYVDFTMPYLDSSVSMVVKLYQLVARTDLCDTLLCVVIADVGFLKSGTSRVLVIVVMFILTIALQVYTANLTSILADRTKPKPPPWKDVQEIRRGNRTVGYQKDSWMRGFLIDQLGLKDDQLRAFTSRKEYKDVLSNEDKEKGGVDAIFDETPYLKLFLSQCPSCQMVGPIYKAGGFAFVSISKELYLGLEFFNCNIGSDSKCDDVS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00011 720 Gene3D - 419 542 - -
Pral4623g00011 720 PANTHER OS06G0188250 PROTEIN 15 375 - -
Pral4623g00011 720 Gene3D - 146 398 - -
Pral4623g00011 720 Pfam Receptor family ligand binding region 51 383 IPR001828 -
Pral4623g00011 720 SMART GluR_14 420 707 IPR001320 GO:0015276|GO:0016020
Pral4623g00011 720 SUPERFAMILY Periplasmic binding protein-like I 28 419 IPR028082 -
Pral4623g00011 720 SUPERFAMILY Periplasmic binding protein-like II 420 693 - -
Pral4623g00011 720 Gene3D - 64 373 - -
Pral4623g00011 720 Pfam Bacterial extracellular solute-binding proteins, family 3 447 681 IPR001638 -
Pral4623g00011 720 Gene3D - 544 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00011 Pral-Chr4623 229952 234380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00011 9 693 Ion Channels AT2G29120 33.506 9.79e-113 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00011 K05387 - qsu:112025251 459.144