Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00009 ATGGAGAGAAGGGGAAGAGAATCTCTCATATTTGTGAGCTTATTATGCCTAATGGTAACCCTAACAGAGTCTGCGACTGTGACCATACCAGTAGGAGTGATTCTGGATTTGAACTCATCACTTGGTAGTATCACCCTCAACTGCACCAACCTCGGACTCCTCGACTTCTATTCCACACATGATTCCTACGCGACCAGGCTCCAACTCCATTTCTGGCATTCTGGAAACGATCTCCTCACTGCAGCTATTGCAGCTTGGAATCTGATAAATGGAAAAAAGGTGCATGCAATCCTGGGACCTCAAAACTCAGAGCAAGCGAGGTATGTTGTAGAACTTGGTAAGACGAACGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTGTTGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATCGAAGCTTATGATTGGCAGTCTGTGATCCCCATTTATGAAGATCCAGAATTCGGCAACGACCTCATTCCGTGCCTCTCTTATGCCCTGCAAGACATGGACACTCGAATGCCTTACATAAGTGTCATCAATCAAACTTCCACGGATTCTCAAATCGCCGGTGAGCTTAACAAGATAAAAGCCCAGCGAACATTTGTGTTTGTCGTTCATATGTCTCTGGAGCTTTGGTCAATATTTGCGGAACATGCCAAAAATGCGGACATGATGAGCGAAGGATACGCTTGGATACTTACGCAAGGCCTGTCTTCTGTGATGGATCCCGAAGCTTTAGATGTCAGAATGAAAGGCTATATGGATGGTGCGTTGGGTGTGAGGCCATTCGTGTTATCCAACTTAACTAAGCGCCTTTCCTTAGTTAGAAAATTAAAGTCTGAGTACGATAAAACTCTTTCTCTAAATGGCTTGTGGGCTTATGACACTATCACAGCATTGGCCAGAGCCGTAGAGAAGGCCGGCTTAGTCAGTTTTAATGAAAGTGGAGCTGATCTTCGCAACGAAACAGGCCCAGAACTTCGCGGAGCAATTCTGGATACTGATTTCGTTGGCTTGTCAGGGAATTTCAATTTGAGGCAAGAACAACTAGAACAATCACATGTTGTGGTATACAATGTGCAAGGCCAAAAAGAAAGGACAATTGGAAATTGGAGCCCCGAAAAAGGACTTGTTCGAATGCAAAGTGTACGTGGTGAACCAATATGGCCGGGTAACACAAAGGAGATACCACCCAAGTTGAAAGTTGGGGTCCCAAAGACGCATTTTACTGAATTTGTTGATGTTAATGGGAGTGTAGAAGGGCAACATGTATCAGTTGCTGGCTTTGCTGTTGATGTATTTGAGCAAGTGGTTGGCCTCTTGCCATTACCTTTACGTTATGAGTTTGTGCCTTTGAACAACAGTGGTGGAGAGCTGACTCCCTTCAGCTATGATGATCTTCTCTGCCAATTCGCAGACAAGAAAGTTGATGTTGATGTTATAATTGGAGACATTACAATTGTAGTGAGTCGCACAAATTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGTGTGTCCATGGTGGTAAAGGTGAGGTCTGACTCCAAAAGCATGTGGATCCTCTTCAGACCTTTTGATTGGTTACTTTGGTTCATTCTTGTTATGATTCTTGTGGCTGCAACTGTTTTTGTAATTATATTGGAAAAACAAAAAGAAAAGAAAACGGAGGATGATGTCACGGGAAGCAAATCCGAAATTAAAACAAAGGATGATGTTAGAGGAAGCAAATCTGCAAATAAAACAGAGGAAAATGTCGAAGGAAGCAAATCCAAAGAAAACACAGAGGATGATGTCACAGAAAGCAAAGCTGAAAATAAAACAGAGGATGATGTCAGAGGAAGCAAATCCGAAAATAAAACAGAGGATGATGCTGGAGGAAGCAAATCCCAAGACTTTGTCCGCAATCCCTTCCTTATTTACATGAGTGATGTTGGGTTTTTGAAAAGTGGCACATCTAAATGGCTGGTGATAGTGATCATGTTTATATTGACCATAGCGCTGCAAGTTTATACAGCAAATTTGACATCAATTTTAACAGATAGGACAAACCCAAAGCCACCTCCATGGAAGGACGTGCAAGAGATTAGAAGGAGCAATCGGAAAGTGGGATATCAAACGGATTCCTGGATGAGAGTGTTTCTTACTCACCAATTAGGATTGAAGGATGATCAGTTAAGGAATTTTACAAGTCGTGAAGAGTACATGGATGCTTTATCAAATGAAGACAAAGAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCAGGCTCTTCCTTTCCCAATGCCCTTCTTGCCAAATGGCAGGACCAATCTACAAAGCTGGTGGATTTGCCTTTGCATTCCCAAAGAACTCTACCTTGGTCTCAAATTTTTCAACTGCAATATTGGAAGTGACTCAAAATGTGACGATGTTTCGTCAGATGAGGGAGAAAATATCTTTCCCCATCACAGTTGACAGATCCGAATATAAAAGTAGCATTGAGACGCGAAGTTTGAAGATAGGCGACTTTGGAGGCCTTTTCCCAATCATATTGTTTGTTTTGGTTCTCTTCTTCTGCCTTTCAATTCGTAACAAATTGGTTTCATGTTGGCACAATCTCTGGCGGAGAGAGTAA 2691 0.4247 MERRGRESLIFVSLLCLMVTLTESATVTIPVGVILDLNSSLGSITLNCTNLGLLDFYSTHDSYATRLQLHFWHSGNDLLTAAIAAWNLINGKKVHAILGPQNSEQARYVVELGKTNDVPVIWFSPSGPSLLPPRTRFFIHSNSTRSHCSQFEAIAAIIEAYDWQSVIPIYEDPEFGNDLIPCLSYALQDMDTRMPYISVINQTSTDSQIAGELNKIKAQRTFVFVVHMSLELWSIFAEHAKNADMMSEGYAWILTQGLSSVMDPEALDVRMKGYMDGALGVRPFVLSNLTKRLSLVRKLKSEYDKTLSLNGLWAYDTITALARAVEKAGLVSFNESGADLRNETGPELRGAILDTDFVGLSGNFNLRQEQLEQSHVVVYNVQGQKERTIGNWSPEKGLVRMQSVRGEPIWPGNTKEIPPKLKVGVPKTHFTEFVDVNGSVEGQHVSVAGFAVDVFEQVVGLLPLPLRYEFVPLNNSGGELTPFSYDDLLCQFADKKVDVDVIIGDITIVVSRTNCVDFTMPYLDSSVSMVVKVRSDSKSMWILFRPFDWLLWFILVMILVAATVFVIILEKQKEKKTEDDVTGSKSEIKTKDDVRGSKSANKTEENVEGSKSKENTEDDVTESKAENKTEDDVRGSKSENKTEDDAGGSKSQDFVRNPFLIYMSDVGFLKSGTSKWLVIVIMFILTIALQVYTANLTSILTDRTNPKPPPWKDVQEIRRSNRKVGYQTDSWMRVFLTHQLGLKDDQLRNFTSREEYMDALSNEDKENGGVDAIFDETPYLRLFLSQCPSCQMAGPIYKAGGFAFAFPKNSTLVSNFSTAILEVTQNVTMFRQMREKISFPITVDRSEYKSSIETRSLKIGDFGGLFPIILFVLVLFFCLSIRNKLVSCWHNLWRRE 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00009 896 MobiDBLite consensus disorder prediction 579 650 - -
Pral4623g00009 896 Gene3D - 66 373 - -
Pral4623g00009 896 Pfam Receptor family ligand binding region 64 383 IPR001828 -
Pral4623g00009 896 Pfam Bacterial extracellular solute-binding proteins, family 3 447 829 IPR001638 -
Pral4623g00009 896 Gene3D - 146 398 - -
Pral4623g00009 896 Gene3D - 541 739 - -
Pral4623g00009 896 SUPERFAMILY Periplasmic binding protein-like I 28 419 IPR028082 -
Pral4623g00009 896 SMART GluR_14 420 840 IPR001320 GO:0015276|GO:0016020
Pral4623g00009 896 SUPERFAMILY Periplasmic binding protein-like II 419 826 - -
Pral4623g00009 896 Gene3D - 419 540 - -
Pral4623g00009 896 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 881 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00009 Pral-Chr4623 165321 170696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00009 690 895 Ion Channels AT2G29110 35.349 4.09e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00009 K05387 - qsa:O6P43_022275 418.313