Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00007 ATGGTTAACATAACTGCCATTGATCCAGATTCAACAGATGGTGAAATTGACGACATTCTTGTCAAGTTAAACAACAGGCGAACACATGTATTTCTTGTCCATATGAGCATGGATTTGGGAATAAGATTTATTCAGTCTGCAGAAGAACAAGACATGATGGGAGAAGGATATGCTTGGATACTTACCCAGGGGTTATCTTCTTTAACAGATCCTCAAGTTACGACTGGGAACCCTTTGAAAGGATACATGCAAGGTGCATTGGGAGTGAGGCCAATGGATTCGAACAAAACACGTTGGCGTAGGTGGAAAGAGAGTTATTTTATCTACAGGTTCAATCGTACCCTAACAGTCTATGGATGGTGGGCTTATCACACAATTGAAGCATTGGCTATGGCAGTGGAGAAGGCAGGCGCAGACAATGGCGCAAAACTTCGCGACGAAATTCTAGCCGCTAATGTCTCATCAAGCGAGTCATCGGGCCTAAATTTTAGTCTAAGTAAGGGACAACTAGATCAATCGGTGGTGCTTGAAGTATACAATGTGATAGGAGCGAGAGAAAGGGTCATTGGTTATTGGAGCCCTGAAACTGGACTTGTTCAAAATTTTAGTAAAGGTGCTAAGATATCTGGTAAATACCAACTAAAGGATCCATTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGGATTGGAGTCGTAACAACAAATTCTTTTCCTGAATTGGTGAATGTAGATAATTCGACTACGCCGGTGATGATTAATGGCTTTGCTTTTCATGTGTTCTTAAAAGTTGTCGATGTTTTGCCATTTCCGCTCGATTATGAGTTTGTCCCCTTGCCAAACAAAAGTAGAAGCGGTACTCCCATGTATGACGATATTCTCTGCAACCAAATGAAAGACAGGGATCTTGATGCTATAATTGGAGACATCACAGTTGTGGCACATCGTACAAACTGTGTTGATTTCACTTTGCCATATTTAGATTCAAGTGTAACAATGATGGTAAGGGTGGAGAATGCGTCCATAAGTAAGGGGATCCTCTTGAAACCTTTCAAATGGTCACTATGGTTAATTCTTGGTGGGATTTTTTCGGCTGCAACTATTATCATAATTATATTAGAAAGAAATGAAACCAACCAATTTCGCTTCAATCCCTTCCTTGTTTACAAGATCGATGTTATGGAGAATTTTGCAAGCAGTGCTACAGGATGGATGGTGATACTGACATCATTCTTATTCATGTTGGTGGTGCAAGTTTACACAGCGAATTTAACGTCAATTTTAACACAAAGCAAAATGAAAGAGCCTTCATTTAAGGACGAAAATGAAACTAAAAGCAGCAACCTGTCCGTGGGATATCAAGCTGGGTCATGGGTGGAAGGGTTTTTGGTTAGCCAACTCAAACTCAACTCGTCCCAATTGAAGGCTCTAGGAAGTCGCGAAAAGTACAACGAATCACTGTCAACAGGAACCAAACATGGAGGAGTGGATGCCATTTTTGATGAAACCCCTTACCTCACGCTCTTCCTCTCCAAATATAGATCTCATTTCATGATGACAGGACCGAACTATAAAACTGGCGGATTTGCCTTTGCATTCCCAAAGGGATCTATCCTGGCCTCCCATTTCTCAAATGCAATCTTAAATGTGACGCAAGACGTGGAGCCATATCGTGAGCTGATGGCCAAGAACTCCTTACCCACTTCCATTGAAGATTTTGAATTTGAAGAGCAGAGTGATATAGAGACGTCAAGTCTGAGTATAGCTAACTTTGAAAGCCTTTACCCTGTCCTAATATCCTTAGTGGCTCTCTCTTTAGGCCTTGCCACTCTGAATCCATCAGTGATCACACGGTTGCATGAGAAGTTAAGCCGCAATCAGCTAAGGCTTAAATAA 1902 0.4164 MVNITAIDPDSTDGEIDDILVKLNNRRTHVFLVHMSMDLGIRFIQSAEEQDMMGEGYAWILTQGLSSLTDPQVTTGNPLKGYMQGALGVRPMDSNKTRWRRWKESYFIYRFNRTLTVYGWWAYHTIEALAMAVEKAGADNGAKLRDEILAANVSSSESSGLNFSLSKGQLDQSVVLEVYNVIGARERVIGYWSPETGLVQNFSKGAKISGKYQLKDPLWPGDTLDKPPKLRIGVVTTNSFPELVNVDNSTTPVMINGFAFHVFLKVVDVLPFPLDYEFVPLPNKSRSGTPMYDDILCNQMKDRDLDAIIGDITVVAHRTNCVDFTLPYLDSSVTMMVRVENASISKGILLKPFKWSLWLILGGIFSAATIIIIILERNETNQFRFNPFLVYKIDVMENFASSATGWMVILTSFLFMLVVQVYTANLTSILTQSKMKEPSFKDENETKSSNLSVGYQAGSWVEGFLVSQLKLNSSQLKALGSREKYNESLSTGTKHGGVDAIFDETPYLTLFLSKYRSHFMMTGPNYKTGGFAFAFPKGSILASHFSNAILNVTQDVEPYRELMAKNSLPTSIEDFEFEEQSDIETSSLSIANFESLYPVLISLVALSLGLATLNPSVITRLHEKLSRNQLRLK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00007 633 Gene3D - 226 349 - -
Pral4623g00007 633 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 609 IPR015683 -
Pral4623g00007 633 SUPERFAMILY Periplasmic binding protein-like I 8 193 IPR028082 -
Pral4623g00007 633 Gene3D - 350 474 - -
Pral4623g00007 633 SMART GluR_14 231 558 IPR001320 GO:0015276|GO:0016020
Pral4623g00007 633 Pfam Receptor family ligand binding region 13 152 IPR001828 -
Pral4623g00007 633 SUPERFAMILY Periplasmic binding protein-like II 226 555 - -
Pral4623g00007 633 Gene3D - 3 127 - -
Pral4623g00007 633 Pfam Bacterial extracellular solute-binding proteins, family 3 297 556 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00007 Pral-Chr4623 92502 95544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00007 1 557 Ion Channels AT2G29120 33.278 1.25e-80 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00007 K05387 - qsu:111985481 408.297