Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00006 ATGCAGAGAAGGCGAAGAGCAATTGTCATACTTACGGTGGGCTTAGTATGCCTAATGATTACCCTAACACAGTCTGAAACTGAATCTATACCAGTGGGAGTGATTCTGGATTCGGATTCATCCCTTGGTTCCATGGCTCTCAGCTGCATCAACATCTCACTCCGTGATTTCTATTCCACGCATGATTCTAATTCAACAAAGCTCCAACTTCATTTCAGGGATTCCGGAAAGAATCTCACCACTGCAGCTTCTGCAGCTCGAGATCTAATTAACAAGGAAAAGGTGCATGCAATCCTGGGACCTAAAAATTCAGAGCAAGCAAGGTTTGTTGTAGAGCTTGGTAACAAGTCTGGTGTACCTGTGATTTGGTTTTCTTTATCTGGTCCATCTCTTTTGCCGCCTCGTTCCCGATTCCTCATCCATTCCATCTCCACTGGAAGCCAGTGCTCTCAGTTCGAAGCTATAGCAGCCATCATCCAAGCTTATAATTGGCAATCTGTGATCCCCATTTATGAAGAGCCAGAATTCGGCAATGACCTCATTCCATGTCTCTCTTATGCCTTGCAAGACATGGACACTCGAATGCCTTATACAAGTTCCCTTCGTCAGGATTCCTCGGATGATCAAATCACCCAAGAGCTTAAAAACATAAAAGGCAACCGAACATATGTATTTCTTGCCCATATGACCGTAGACCTTTGGTCAAGGCTATTGAAACGTGCACAAAAGGAAGGGCTGATGAGTGAAGGATACGTTTGGATACTTACGCAAGGCCTATCTTCTGTGCTAAATCCCGAAGCTCTAGATAAGAAGGCGAAAGGCTACATGGATGGTGCTTTGGGTGTGAAGCCATCATTGGATGTTTCCAACATAACTAAGCGCGCTTCCTTAGCGACAACATTAAAGTCCAAGTACGGTAAAACTCTCTCTCTATATGGCCTATGGGCTTATGACACTATCACAGCGTTGGCCAATGCGGTAGAGAAGGCCGAATTAGTTAATTCTGCTTCCAGATATAGGATTCAAAGCGGAGTTGATCTTCGCAATGAAACAGGCCCAGAACTTCGCAAAGCAATTCAGGATACTGATTTCCAAGGCCTATCAGGAGATTTCAATTTGAGCCAAGGACAACTAGAAACATCACAAATTGTAGTATACAATGTGAAAGGCCAAAATGAAAGCATCATTGGACATTGGAGCCCCGAAAATGGCCTTAAGCTTATTCACAATCAAAGTGAAGGTAACGCAACGGAGAGACTGGCAAAGTTGAAAATTGGGGTCCCAAGAACGCATTTTACTGAATTTGTTAATTACTCGTCTGATCCTGAAGAAGGGCAGAATAAATCAGCTGCCGGTGGCTTTGCTGTTGATGTGTTCAAAAGAGTGGTTGATGTTTTGCCATTTTCTCCATCTTATGACTTTGTGCCCGTAAACATAATGGAGAGCAGACTCCCTCGAGCTACGATGATCTTCTCTGCCAAATCAAAAACAAGCTTGGATACTCTCAGGCATGGAACTAGAAAATATTGA 1530 0.4359 MQRRRRAIVILTVGLVCLMITLTQSETESIPVGVILDSDSSLGSMALSCINISLRDFYSTHDSNSTKLQLHFRDSGKNLTTAASAARDLINKEKVHAILGPKNSEQARFVVELGNKSGVPVIWFSLSGPSLLPPRSRFLIHSISTGSQCSQFEAIAAIIQAYNWQSVIPIYEEPEFGNDLIPCLSYALQDMDTRMPYTSSLRQDSSDDQITQELKNIKGNRTYVFLAHMTVDLWSRLLKRAQKEGLMSEGYVWILTQGLSSVLNPEALDKKAKGYMDGALGVKPSLDVSNITKRASLATTLKSKYGKTLSLYGLWAYDTITALANAVEKAELVNSASRYRIQSGVDLRNETGPELRKAIQDTDFQGLSGDFNLSQGQLETSQIVVYNVKGQNESIIGHWSPENGLKLIHNQSEGNATERLAKLKIGVPRTHFTEFVNYSSDPEEGQNKSAAGGFAVDVFKRVVDVLPFSPSYDFVPVNIMESRLPRATMIFSAKSKTSLDTLRHGTRKY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00006 509 SUPERFAMILY Periplasmic binding protein-like I 26 404 IPR028082 -
Pral4623g00006 509 Gene3D - 147 402 - -
Pral4623g00006 509 Gene3D - 41 381 - -
Pral4623g00006 509 Pfam Receptor family ligand binding region 51 390 IPR001828 -
Pral4623g00006 509 PANTHER OS06G0188250 PROTEIN 11 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00006 Pral-Chr4623 68410 72594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00006 8 472 Ion Channels AT2G29120 36.310 1.47e-87 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00006 K05387 - qsa:O6P43_022275 348.591