Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00003 ATGGATATGCCATTTCTGAAACTGCTATCCCATTTTCTGCTTCTCACCTTCTTGAATTTCGCTTCCACTTCTGAAGTAGACATCCCTGTTTACTATGGCCACAACTGCACAAGGAATAAAAACTTCACTTCCCATAGCCCCTACCAGTTCAACCTTCACAATCTTTTATTTTCCTTCCATTCCATGGCCATAGTAAACGGGGATGTCCCCACTCCTGAATTCAACACCACCAGCTTTGGCCGCACAAACACGAGCGACGCCGTATATGGAGAGTACATGTGCCGAGGTGACGTCCCCACTCAGATCTGTCGAGATTGCATTCAGGACGCCAAAAATAGAATAGCCTCGATGTGTCCCTACGACAAAGAGGCAATCATCTGGTACGACGAGTGCTTCCTCCGCTATTCCGACCGCTCTTTCTTCTCCACCCTCCAACAACAGCCTGTTCAACAACAGCCTGTCAGAATTAGAGAAATATCACACATCCAAATCGGAAGTGGAACAGATAAGACAGATAAGGAATTGTACAAGACATTGAATGATGCGGTGGTGGAGGCAGTGACATCAGATACCAAGAAATTCGCAACAAAAGAAGCATACTTGAGTACTGGAGGATCGGTATACACTCTTGCACAGTGCACGCCGGATCTGTCCCTACAATTCTGTGGTGAGTGTCTACATGGCCTTATAGAAGATATTCTGAAGGAGGAGGACTACCAGAGTGGTGGATTTCAGAATCCGAGCTGCAATTTGAGATTCGAAAGATACCGATTTTATTATAAGGACAAGCAGCCTCCCTACGGTGGTTCTACCTTTCAAGGGTTTGGAAGTCCTGCTCTTGCAGACTCGAACTGCTCGACCACCGAAAGTTTTACTGCCAACGATCCCTACCTAAACAACCTCAAGAGTCTCACTCTCGAGCTCTCCATGTCATCCAACGACACCAAAAGCAATGGATTCCACAACACCACAGTCGGAAACAATTCCAACACTACCGTCTACGGCCTCTTCATGTGTCGGGGTGACGTGCCCCTTGGGCTCTGCCATGAATGCGTCAGTAACGGAATTGACGAACTGAACTTTAGGTGTCCCTCTTCGAAGGAGGCTATCATTTGGTATGACATGTGCATGCTTCGCTACTCCGATTGCTCTTTCTTCTCTACCCAAGAGACACAACCTATATATACAGAAGCTGGTGGGGATATGCATGGAAACCAAACAGATGGCTTCAATAAGCTATTAGCTGCTACATTGAGTGATCTATTGAAGACGATATCAAACTCACCGCCCGTAGGAGCGAAGAATTTTGCAACAAAAAAAGAAGTCAGTCCTTCAGAGCTTACACCATTATATACCCTTGCACAATGTACTCCAAACCTGTCTAGCCAAGATTGCCAAAAATGTCTACAGGATGCTCAGGAACATATGACGTCATGTTGTCTTGGAAAGCGAGGAGGAAATGTCATGAGTCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATGATGACAGTAAAAGTGCTGTTTCGATGCCTCCTGCACATCCCCCGACTCCCGAAGTTCACATTTCGGGAAATACAGGAAAAGATCAGGACCACTCACGAACAATTATAACAGCGGTGTCCCTTACTGTTGTCTCAATCATGCTTTTTTGTTTCGGCTTCTATTACTGGAAGAGAAAAAAGAGCAACAGTTATAAGGCGATTCTGAAGAAAAATTTTGGAGCTGAAGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTAGAGTTCAAGAATGAGGTTTTACTAATTGCCAAACTTCAACACAGAAACTTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTATTTTTTATTCGGTTTGTCCCTTCTAATCAAACTGGGTTATATGTCTCCAGAATATATCAAGTTTGGACTATTTTCTGAGAAATCAGATATTTACAGCTTTGGAGTCATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGCTGGTGGACTCTTAAGCGATGCTTGGAAGCATTGGAGGGATGACAATTTGATAGCAATATTGGATTCGAATCTGACAGAAGTTGGGTCACATGGTGAAATAATCAAATGCATCCATATTGGCTTGCTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGTTGTTCAATATCTGAGTAATGATTCAATTCAATTGCCAATTCCTCAAGAGCCAGCATTCTTCATCCATAGTCAAATAGAACCAGTGGAAACCAGTAGGTCAATGGAGGCTCAATTTGCCAACCATAATCAATATTCCATCAATGAAATAATTACAATTTGCACATTTCTAACAGCACCCACTTCTGATAATTGCAAACAAGCTCTAAATTGTGGAAATCAAAATTTGATGGTTTCTTGTTCATATGATATGACAATTTACATTTGGGATTTCATGGTTGAGGATGCACTAGTGAGTGGATATGATCATCGTAGTGCATTTGCCACTGGTGTTGATATGAGCATGCTTCTTGAGGGGCTTATGAGAGTTCTGGTGCTATAA 2769 0.4218 MDMPFLKLLSHFLLLTFLNFASTSEVDIPVYYGHNCTRNKNFTSHSPYQFNLHNLLFSFHSMAIVNGDVPTPEFNTTSFGRTNTSDAVYGEYMCRGDVPTQICRDCIQDAKNRIASMCPYDKEAIIWYDECFLRYSDRSFFSTLQQQPVQQQPVRIREISHIQIGSGTDKTDKELYKTLNDAVVEAVTSDTKKFATKEAYLSTGGSVYTLAQCTPDLSLQFCGECLHGLIEDILKEEDYQSGGFQNPSCNLRFERYRFYYKDKQPPYGGSTFQGFGSPALADSNCSTTESFTANDPYLNNLKSLTLELSMSSNDTKSNGFHNTTVGNNSNTTVYGLFMCRGDVPLGLCHECVSNGIDELNFRCPSSKEAIIWYDMCMLRYSDCSFFSTQETQPIYTEAGGDMHGNQTDGFNKLLAATLSDLLKTISNSPPVGAKNFATKKEVSPSELTPLYTLAQCTPNLSSQDCQKCLQDAQEHMTSCCLGKRGGNVMSPSCNLRFESYRFYDDSKSAVSMPPAHPPTPEVHISGNTGKDQDHSRTIITAVSLTVVSIMLFCFGFYYWKRKKSNSYKAILKKNFGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFGLSLLIKLGYMSPEYIKFGLFSEKSDIYSFGVIVLEIISGKNISSQCESHESQYAGGLLSDAWKHWRDDNLIAILDSNLTEVGSHGEIIKCIHIGLLCVQGNPGVRPSMNKVVQYLSNDSIQLPIPQEPAFFIHSQIEPVETSRSMEAQFANHNQYSINEIITICTFLTAPTSDNCKQALNCGNQNLMVSCSYDMTIYIWDFMVEDALVSGYDHRSAFATGVDMSMLLEGLMRVLVL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00003 922 ProSiteProfiles Gnk2-homologous domain profile. 279 385 IPR002902 -
Pral4623g00003 922 ProSiteProfiles Gnk2-homologous domain profile. 30 140 IPR002902 -
Pral4623g00003 922 SUPERFAMILY Protein kinase-like (PK-like) 584 828 IPR011009 -
Pral4623g00003 922 ProSiteProfiles Protein kinase domain profile. 599 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4623g00003 922 ProSiteProfiles Gnk2-homologous domain profile. 153 258 IPR002902 -
Pral4623g00003 922 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 560 674 - -
Pral4623g00003 922 Gene3D Transferase(Phosphotransferase) domain 1 685 808 - -
Pral4623g00003 922 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Pral4623g00003 922 ProSiteProfiles Gnk2-homologous domain profile. 391 502 IPR002902 -
Pral4623g00003 922 Pfam Protein tyrosine and serine/threonine kinase 692 798 IPR001245 GO:0004672|GO:0006468
Pral4623g00003 922 Pfam Protein tyrosine and serine/threonine kinase 600 684 IPR001245 GO:0004672|GO:0006468
Pral4623g00003 922 Pfam Salt stress response/antifungal 285 382 IPR002902 -
Pral4623g00003 922 Pfam Salt stress response/antifungal 36 137 IPR002902 -
Pral4623g00003 922 Pfam Salt stress response/antifungal 406 500 IPR002902 -
Pral4623g00003 922 Pfam Salt stress response/antifungal 171 256 IPR002902 -
Pral4623g00003 922 Gene3D - 279 385 IPR038408 -
Pral4623g00003 922 Gene3D - 400 502 IPR038408 -
Pral4623g00003 922 Gene3D - 163 258 IPR038408 -
Pral4623g00003 922 Gene3D - 30 140 IPR038408 -
Pral4623g00003 922 Gene3D Phosphorylase Kinase; domain 1 560 674 - -
Pral4623g00003 922 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 280 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00003 Pral-Chr4623 52978 59999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00003 694 820 Receptor kinase-like Gene Family AT4G05200 40.945 7.09e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4623g00003 PK_Tyr_Ser-Thr 1.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00003 - - pcin:129286968 542.732