Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4623g00002 ATGTGCATGCTTCGCTACTCCAATCGCTCTTTCTTCTCTACCCAAGACACACAACCTATATATACAGAAGCTGCTGGGGATATGCTTGGAAACCAAACAGATGGCTTCAATCGGCTATTAGCTGCTACATTGAGTGGTCTAGTGAAGGCGATATCAAACTCACCGCCCGTAGGAGTGAAGAATTTTGCGACAAAAAAAGAAGTCAGCACTTCAGAGCTTACAACGTTGTATACTCTTGCACAATGTACTCCAAACCTGTCTAGCCAAGATTGCCAAAAATGTCTACAGGATGCTCAGGAACTTATGACGTCATGTTGTCTTGGAATGCGAGGAGGAAAAGTCATGAGTCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATGATGACAGTAAAAGTGCTGTTTCGATGCCTCCTGCACATCCCCCGACTCCCGAAGTTCACATTTCGGGAAATACAGGAAAAGATCAGGACCACTCACGAACAATTATAACAGCGGTGTCCCTTACTGTTGTCTCAATCATGCTTTTTTGTTTCGGCGTCTATTACTGGAAGAGAAAAAAGAGCAACAGTTATAAGGCAATTCTGAAGAAAAATTTCGGAGCTGAAGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTAGAGTTCAAGAATGAGGTTTTACTAATTGCCAAGCTTCAACACAGAAACTTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTACTTTTTATTGGGTTCACAAAAGTCAAGAGTGTTAAATTGGCCAAAGCGTCACAAAATTATAGGAGGAATTGCTCGAGGAGTTCTTTATCTTCATGAATACTCACGTGTTAAAATAATACATCGAGATCTCAAACCTAGCAATATTTTGTTAGATGATGAGATGAATCCGAAAATTTCTGATTTTGGAATGGCGAGAATTGTTGGCATTAATGAAACTAGGGGAAACACGAATAGAATTGTTGGGACATTGGGTTACATGTCTCCAGAATATATCAAGTTTGGACTATTTTCTGAGAAATCAGATATTTACAGCTTTGGAGTCATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGCTGGTGGACTCTTAAGCGATGCTTGGAAGCATTGGAGGGATGACAATTTGATAGCGATATTGGATTCGAATTTGACAGAAGCTGGGTCACATAGTGAAATAATCAAATGCATCCATATTGGCTTGCTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGTTGTTCAATATCTGAGTAATGATTCAATTCAGTTGCCAATTCCTCAAGAACCAGCATTCTTCATCCATAGTCAAATGGAACCAGCGGAAAGCAGTAGGTCAATGGAGGCTCAACTTGCCAACCATAATCAATATTCCATCAATGAAATGTCAAAGAATATAATATCTCCTCGCTAG 1659 0.3924 MCMLRYSNRSFFSTQDTQPIYTEAAGDMLGNQTDGFNRLLAATLSGLVKAISNSPPVGVKNFATKKEVSTSELTTLYTLAQCTPNLSSQDCQKCLQDAQELMTSCCLGMRGGKVMSPSCNLRFESYRFYDDSKSAVSMPPAHPPTPEVHISGNTGKDQDHSRTIITAVSLTVVSIMLFCFGVYYWKRKKSNSYKAILKKNFGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLLGSQKSRVLNWPKRHKIIGGIARGVLYLHEYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARIVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDIYSFGVIVLEIISGKNISSQCESHESQYAGGLLSDAWKHWRDDNLIAILDSNLTEAGSHSEIIKCIHIGLLCVQGNPGVRPSMNKVVQYLSNDSIQLPIPQEPAFFIHSQMEPAESSRSMEAQLANHNQYSINEMSKNIISPR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4623g00002 552 ProSiteProfiles Protein kinase domain profile. 225 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4623g00002 552 ProSiteProfiles Gnk2-homologous domain profile. 17 128 IPR002902 -
Pral4623g00002 552 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 186 300 - -
Pral4623g00002 552 Pfam Protein kinase domain 226 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4623g00002 552 SMART serkin_6 225 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4623g00002 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Pral4623g00002 552 Gene3D Transferase(Phosphotransferase) domain 1 301 506 - -
Pral4623g00002 552 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 526 - -
Pral4623g00002 552 Gene3D - 24 128 IPR038408 -
Pral4623g00002 552 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Pral4623g00002 552 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Pral4623g00002 552 FunFam cysteine-rich receptor-like protein kinase 10 301 506 - -
Pral4623g00002 552 SUPERFAMILY Protein kinase-like (PK-like) 209 530 IPR011009 -
Pral4623g00002 552 CDD STKc_IRAK 231 499 - -
Pral4623g00002 552 Gene3D Phosphorylase Kinase; domain 1 186 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4623g00002 Pral-Chr4623 27231 29841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4623g00002 2 552 Receptor kinase-like Gene Family AT4G05200 43.684 2.39e-155 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4623g00002 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4623g00002 - - pcin:129286968 723.391