Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4621g00006 ATGCTTTTTTGTTTCGGCGTCTATTACTGGAAGAGAAAAAAGAGCAACAGTTATAAGGCAATTCTGAAGAAAAATTTCGGAGCTGAAGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTGGAGTTCAAGAATGAGGTTTTACTAATTGCCAAACTTCAACACAGAAACTTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTATTTTTTATTTGGTTCACAAAAGTCAAGAGTGTTAAATTGGCCAGAGCGTCACAAAATTATAGGAGGAATTGCTCGAGGAGTTCTTTATCTTCATGAATACTCACGCATTAAAATAATACATCGAGATCTCAAACCTAGCAATATTTTGTTAGATGATGAGATGAATCCGAAAATTTCTGATTTTGGAATGGCGAGAATTGTTGGCATTAATGAAACTAGGGGAAACACGAATAGAATTGTTGGAACATTGGGTTACATGTCTCCAGAATATATCAAATTTGGATTATTTTCTGAGAAATCAGATGTTTACAGCTTTGGAGTCATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGTTGGTGGACTCCTAAGCGATGCTTGGAAGCATTGGAGGGATGACAATTTGATAGCGATATTGGATTCGAATTTGACAGAAGCCGGGTCACATAGTGAAATAATCAAATGCATCCATATTGGCTTGCTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGCTGTTCAATATCTGAGTAATGATTCAATTCAGTTGCCAATTCCTCAAGAACCAGCATTCTTCATCCATAGTCAAATGGGACCAGCGGAAAGCAGTAGGTCAATGGAGGCTCAACTTGCCAACCATAATCAATATTCCATCAATGAAATGTCGGAGAATATAATATCTCCTCGCTAG 1134 0.3695 MLFCFGVYYWKRKKSNSYKAILKKNFGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFGSQKSRVLNWPERHKIIGGIARGVLYLHEYSRIKIIHRDLKPSNILLDDEMNPKISDFGMARIVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVYSFGVIVLEIISGKNISSQCESHESQYVGGLLSDAWKHWRDDNLIAILDSNLTEAGSHSEIIKCIHIGLLCVQGNPGVRPSMNKAVQYLSNDSIQLPIPQEPAFFIHSQMGPAESSRSMEAQLANHNQYSINEMSENIISPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4621g00006 377 SMART serkin_6 50 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4621g00006 377 Pfam Protein kinase domain 51 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4621g00006 377 CDD STKc_IRAK 56 324 - -
Pral4621g00006 377 SUPERFAMILY Protein kinase-like (PK-like) 34 351 IPR011009 -
Pral4621g00006 377 ProSiteProfiles Protein kinase domain profile. 50 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4621g00006 377 Gene3D Transferase(Phosphotransferase) domain 1 126 331 - -
Pral4621g00006 377 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Pral4621g00006 377 Gene3D Phosphorylase Kinase; domain 1 11 125 - -
Pral4621g00006 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral4621g00006 377 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 376 - -
Pral4621g00006 377 FunFam cysteine-rich receptor-like protein kinase 10 126 331 - -
Pral4621g00006 377 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4621g00006 Pral-Chr4621 68818 70743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4621g00006 12 377 Receptor kinase-like Gene Family AT4G11480 51.902 1.67e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4621g00006 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4621g00006 - - pcin:129286968 560.451